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Citing CMDGA
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Assay category
6
DNA methylation
Assay
480
total RNA-seq
251
ChIP-seq
42
DNase-seq
24
ATAC-seq
9
snATAC-seq
7
Hi-C
7
WGBS
6
RRBS
6
pCHi-C
5
single cell RNA-seq
5
small RNA-seq
2
Capture-C
1
RNA microarray
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
4
hg19
Organism
6
Homo sapiens
Biosample type
4
tissue
2
primary cell
Organ
6
epithelium
5
musculature of body
4
kidney
2
brain
2
heart
2
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
0
blood
Life stage
4
adult
2
unknown
Available data
4
bed bedMethyl
4
bigBed bedMethyl
2
fastq
Platform
2
Illumina Genome Analyzer IIx
Run type
2
single-ended
Read length (nt)
2
36
Library made from
6
DNA
Date released
4
August, 2017
2
July, 2019
Lab
6
AMP-T2D consortium
Replication type
4
isogenic
2
unreplicated
Audit category:
1
inconsistent ontology term
month_released!
October, 2019
Showing 6 of 6 results
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Experiment
DSR253RYM
released
Audit error
1
RRBS
of cardiac fibroblast
Homo sapiens
cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR488BRN
released
RRBS
of skeletal muscle cell
Homo sapiens
skeletal muscle cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR698044
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (72 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR637767
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR745497
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (71 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR621123
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP