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Assay
1338
total RNA-seq
1319
ChIP-seq
508
ATAC-seq
368
single cell RNA-seq
206
DNase-seq
87
RNA microarray
84
snATAC-seq
70
WGBS
54
pCHi-C
30
Hi-C
19
RRBS
15
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
0
whole genome sequencing assay
Project
3
AMP
RFA
3
AMP2
Experiment status
3
released
Organism
3
Homo sapiens
Biosample type
3
cell line
Organ
liver
2
kidney
Life stage
3
unknown
Library made from
3
RNA
Date released
3
August, 2021
Lab
3
Bing Ren, UCSD
Replication type
2
isogenic
1
unreplicated
Audit category:
1
inconsistent ontology term
assay_title!
MPRA
organ_slims!
liver
Showing 3 of 3 results
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Experiment
DSR433YZO
released
Audit error
1
STARR-seq
of Synthesized DNA
Homo sapiens
Synthesized DNA
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR894OMX
released
STARR-seq
of HEK293T
Homo sapiens
HEK293T
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR090FJR
released
STARR-seq
of HEK293T
Homo sapiens
HEK293T
Lab:
Bing Ren, UCSD
Project:
AMP