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Citing CMDGA
Clear Filters
Assay category
6
DNA methylation
Assay
280
ChIP-seq
196
total RNA-seq
42
DNase-seq
31
ATAC-seq
8
Hi-C
6
WGBS
3
pCHi-C
3
small RNA-seq
2
RRBS
2
STARR-seq
1
single cell RNA-seq
1
whole genome sequencing assay
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
2
GRCh38
Organism
6
Homo sapiens
Biosample type
5
tissue
1
cell line
Organ
51
pancreas
47
epithelium
8
heart
6
adipose tissue
6
connective tissue
5
liver
2
blood vessel
2
spleen
2
vasculature
1
limb
1
musculature of body
Life stage
3
adult
2
child
1
embryonic
Available data
2
bam
2
bed bedMethyl
2
bigBed bedMethyl
2
bigWig
2
fastq
Platform
1
Illumina HiSeq 2500
1
Illumina HiSeq X Ten
Run type
1
paired-ended
1
single-ended
Read length (nt)
1
100
1
151
Library made from
6
DNA
Date released
3
August, 2017
2
July, 2019
1
November, 2018
Lab
6
AMP-T2D consortium
Replication type
4
unreplicated
2
isogenic
month_released!
October, 2018
target.investigated_as!
transcription factor
Showing 6 of 6 results
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Experiment
DSR696NUE
released
WGBS
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR372NHK
released
WGBS
of muscle of leg
Homo sapiens
muscle of leg female embryo (113 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR496DZA
released
WGBS
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR621783
released
WGBS
of liver
Homo sapiens
liver male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR259530
released
WGBS
of liver
Homo sapiens
liver female adult (25 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR873184
released
WGBS
of liver
Homo sapiens
liver male adult (31 year)
Lab:
AMP-T2D consortium
Project:
AMP