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Schema
Citing CMDGA
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Assay category
6
DNA methylation
Assay
398
total RNA-seq
73
ChIP-seq
6
ATAC-seq
6
WGBS
3
small RNA-seq
2
DNase-seq
2
pCHi-C
1
RNA microarray
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
2
GRCh38
Organism
6
Homo sapiens
Biosample type
6
tissue
Organ
51
pancreas
47
epithelium
8
heart
6
adipose tissue
6
connective tissue
5
liver
2
blood vessel
2
spleen
2
vasculature
1
limb
1
musculature of body
Life stage
5
adult
1
child
Available data
3
fastq
2
bam
2
bed bedMethyl
2
bigBed bedMethyl
2
bigWig
Platform
3
Illumina HiSeq 2500
Run type
3
single-ended
Read length (nt)
3
100
Library made from
6
DNA
Date released
6
August, 2017
Lab
6
AMP-T2D consortium
Replication type
6
unreplicated
organ_slims!
brain
esophagus
Showing 6 of 6 results
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Experiment
TSTSR472215
released
WGBS
of subcutaneous abdominal adipose tissue
Homo sapiens
subcutaneous abdominal adipose tissue nuclear fraction male adult (55 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR071440
released
WGBS
of subcutaneous abdominal adipose tissue
Homo sapiens
subcutaneous abdominal adipose tissue nuclear fraction female adult (68 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR408109
released
WGBS
of subcutaneous abdominal adipose tissue
Homo sapiens
subcutaneous abdominal adipose tissue nuclear fraction female adult (68 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR162898
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR031119
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR430639
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP