Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay
474
total RNA-seq
153
ChIP-seq
25
ATAC-seq
9
DNase-seq
6
WGBS
5
pCHi-C
4
single cell RNA-seq
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RNA microarray
1
RRBS
Project
4
AMP
1
T1D
RFA
4
AMP
1
T1D
Experiment status
5
released
Genome assembly (visualization)
1
hg19
Organism
5
Homo sapiens
Biosample type
2
primary cell
1
in vitro differentiated cells
1
stem cell
1
tissue
Organ
5
connective tissue
4
eye
3
heart
3
liver
2
adipose tissue
2
brain
2
intestine
2
kidney
2
thymus
1
adrenal gland
1
blood vessel
1
bone element
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
musculature of body
1
ovary
1
pancreas
1
small intestine
1
spleen
1
stomach
1
urinary bladder
1
vasculature
Life stage
4
unknown
1
adult
Available data
2
tsv
1
bam
1
bed bed3+
1
bedpe bed3+
1
fastq
Platform
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
69
Library made from
5
DNA
Date released
2
March, 2020
1
August, 2018
1
February, 2021
1
May, 2021
Lab
4
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Replication type
3
anisogenic
1
isogenic
1
unreplicated
Audit category:
1
inconsistent ontology term
assay_title!
CRISPRi RNA-seq
assembly!
hg18
Showing 5 of 5 results
table-tab-icon
matrix-icon
Download
Experiment
DSR241RZY
released
pCHi-C
of osteoblast
Homo sapiens
osteoblast adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR916ELW
released
pCHi-C
of adult endothelial progenitor cell
Homo sapiens
adult endothelial progenitor cell
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR881MKA
released
Audit error
1
pCHi-C
of mesenchymal stem cell
Homo sapiens
mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR437GEP
released
pCHi-C
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP