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Assay
200
ATAC-seq
198
ChIP-seq
187
single cell RNA-seq
151
total RNA-seq
48
snATAC-seq
47
WGBS
31
DNase-seq
10
Hi-C
10
RRBS
5
pCHi-C
2
small RNA-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
FAIRE-seq
1
GRO-seq
Project
T1D
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
1
hg19
Organism
5
Homo sapiens
Biosample type
24
tissue
6
cell line
5
in vitro differentiated cells
4
stem cell
1
primary cell
Organ
2
connective tissue
Life stage
4
unknown
1
adult
Available data
4
tsv
1
bam
1
bed bed3+
Library made from
5
DNA
Date released
4
March, 2020
1
February, 2021
Lab
5
AMP-T2D consortium
Replication type
3
unreplicated
2
anisogenic
Audit category:
1
inconsistent ontology term
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T1D
Showing 5 of 5 results
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Experiment
DSR241RZY
released
pCHi-C
of osteoblast
Homo sapiens
osteoblast adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR159GRR
released
pCHi-C
of trophoblast
Homo sapiens
trophoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR055YXC
released
pCHi-C
of neural progenitor cell (neural stem cell)
Homo sapiens
neural progenitor cell (neural stem cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR881MKA
released
Audit error
1
pCHi-C
of mesenchymal stem cell
Homo sapiens
mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR543FXV
released
pCHi-C
of mesendoderm
Homo sapiens
mesendoderm
Lab:
AMP-T2D consortium
Project:
AMP