Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay
446
ChIP-seq
113
total RNA-seq
29
ATAC-seq
6
MeRIP-seq
6
pCHi-C
5
STARR-seq
4
Hi-C
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
DNase-seq
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
1
hg19
Organism
6
Homo sapiens
Biosample type
25
tissue
17
primary cell
6
cell line
in vitro differentiated cells
4
stem cell
Organ
2
kidney
2
liver
1
mammary gland
Life stage
5
unknown
1
adult
Available data
5
tsv
1
bed bed3+
Library made from
6
DNA
Date released
4
March, 2020
1
February, 2021
1
May, 2020
Lab
6
AMP-T2D consortium
Replication type
6
isogenic
Audit category:
2
inconsistent ontology term
biosample_type!
in vitro differentiated cells
target.investigated_as!
histone modification
Showing 6 of 6 results
table-tab-icon
matrix-icon
Download
Experiment
DSR583PNT
released
pCHi-C
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR469VYN
released
pCHi-C
of fibroblast cell line
Homo sapiens
fibroblast cell line
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR452PKJ
released
pCHi-C
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR449QWM
released
Audit error
1
pCHi-C
of RCC 7860 VHL
Homo sapiens
RCC 7860 VHL
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR352APC
released
pCHi-C
of MCF-7
Homo sapiens
MCF-7
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR077AQW
released
Audit error
1
pCHi-C
of RCC 7860 vector
Homo sapiens
RCC 7860 vector
Lab:
AMP-T2D consortium
Project:
AMP