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Assay
198
ChIP-seq
136
total RNA-seq
42
ATAC-seq
5
pCHi-C
4
GRO-seq
4
Hi-C
2
Capture-C
2
single cell RNA-seq
1
DNase-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
2
hg19
Organism
5
Homo sapiens
Biosample type
25
tissue
17
primary cell
6
cell line
5
in vitro differentiated cells
4
stem cell
Organ
1
adipose tissue
1
connective tissue
Life stage
3
unknown
2
adult
Available data
3
bedpe bed3+
2
ibed
2
tsv
1
fastq
Platform
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
69
Library made from
5
DNA
Date released
4
March, 2020
1
August, 2018
Lab
5
AMP-T2D consortium
Replication type
2
anisogenic
2
isogenic
1
unreplicated
Audit category:
3
inconsistent ontology term
files.file_type!
tagAlign bed3+
organ_slims!
lymph node
Showing 5 of 5 results
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Experiment
DSR062TSX
released
pCHi-C
of embryonic stem cell
Homo sapiens
embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR719RES
released
Audit error
1
pCHi-C
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR535XNG
released
Audit error
1
pCHi-C
of lymphocyte of B lineage (iPSC)
Homo sapiens
lymphocyte of B lineage (iPSC)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR382TEU
released
Audit error
1
pCHi-C
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP