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Assay
13
ATAC-seq
5
total RNA-seq
3
pCHi-C
2
Capture-C
1
Hi-C
1
RRBS
Project
2
AMP
1
T1D
RFA
2
AMP
1
T1D
Experiment status
3
released
Organism
3
Homo sapiens
Biosample type
1
primary cell
1
stem cell
1
tissue
Organ
3
connective tissue
3
heart
3
liver
2
brain
2
intestine
2
kidney
2
thymus
1
adipose tissue
1
adrenal gland
1
blood vessel
1
bone element
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
musculature of body
1
ovary
1
pancreas
1
small intestine
1
spleen
1
stomach
1
urinary bladder
1
vasculature
Life stage
3
unknown
Available data
2
tsv
bam
1
bed bed3+
Library made from
3
DNA
Date released
2
March, 2020
1
May, 2021
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Replication type
2
anisogenic
1
isogenic
unreplicated
Audit category:
1
inconsistent ontology term
files.file_type!
bam
replication_type!
unreplicated
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Experiment
DSR916ELW
released
pCHi-C
of adult endothelial progenitor cell
Homo sapiens
adult endothelial progenitor cell
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR881MKA
released
Audit error
1
pCHi-C
of mesenchymal stem cell
Homo sapiens
mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR437GEP
released
pCHi-C
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP