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Citing CMDGA
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Assay
478
total RNA-seq
153
ChIP-seq
85
RNA microarray
37
ATAC-seq
13
single cell RNA-seq
10
snATAC-seq
9
DNase-seq
7
pCHi-C
6
WGBS
3
small RNA-seq
2
Capture-C
1
Hi-C
1
RRBS
Project
5
AMP
2
T1D
RFA
5
AMP
2
T1D
Experiment status
7
released
Genome assembly (visualization)
1
hg19
Organism
7
Homo sapiens
Biosample type
3
primary cell
2
tissue
1
in vitro differentiated cells
1
stem cell
Organ
5
connective tissue
4
eye
3
heart
3
liver
2
adipose tissue
2
brain
2
intestine
2
kidney
2
thymus
1
adrenal gland
1
blood vessel
1
bone element
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
musculature of body
1
ovary
1
pancreas
1
small intestine
1
spleen
1
stomach
1
urinary bladder
1
vasculature
Life stage
6
unknown
1
adult
Available data
3
tsv
1
bam
1
bed bed3+
1
bedpe bed3+
1
fastq
Platform
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
69
Library made from
7
DNA
Date released
3
March, 2020
2
May, 2021
1
August, 2018
1
February, 2021
Lab
5
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Replication type
4
anisogenic
2
isogenic
1
unreplicated
Audit category:
1
inconsistent ontology term
Showing 7 of 7 results
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Experiment
DSR241RZY
released
pCHi-C
of osteoblast
Homo sapiens
osteoblast adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR916ELW
released
pCHi-C
of adult endothelial progenitor cell
Homo sapiens
adult endothelial progenitor cell
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR835HRP
released
pCHi-C
of megakaryocyte
Homo sapiens
megakaryocyte
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR881MKA
released
Audit error
1
pCHi-C
of mesenchymal stem cell
Homo sapiens
mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR734BWZ
released
pCHi-C
of lung
Homo sapiens
lung
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR437GEP
released
pCHi-C
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP