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Assay
474
total RNA-seq
152
ChIP-seq
21
ATAC-seq
6
DNase-seq
6
WGBS
4
pCHi-C
4
single cell RNA-seq
3
small RNA-seq
2
Capture-C
1
RNA microarray
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
1
hg19
Organism
4
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
primary cell
1
stem cell
1
tissue
Organ
4
connective tissue
4
eye
3
heart
2
adipose tissue
2
brain
2
intestine
1
adrenal gland
1
blood vessel
1
esophagus
1
gonad
1
large intestine
1
liver
1
lung
1
musculature of body
1
ovary
1
pancreas
1
small intestine
spleen
stomach
1
thymus
1
urinary bladder
1
vasculature
Life stage
3
unknown
1
adult
Available data
2
tsv
1
bam
1
bed bed3+
1
bedpe bed3+
1
fastq
Platform
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
69
Library made from
4
DNA
Date released
2
March, 2020
1
August, 2018
1
February, 2021
Lab
4
AMP-T2D consortium
Replication type
3
anisogenic
isogenic
1
unreplicated
Audit category:
1
inconsistent ontology term
organ_slims!
spleen
stomach
replication_type!
isogenic
Showing 4 of 4 results
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Experiment
DSR241RZY
released
pCHi-C
of osteoblast
Homo sapiens
osteoblast adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR881MKA
released
Audit error
1
pCHi-C
of mesenchymal stem cell
Homo sapiens
mesenchymal stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR437GEP
released
pCHi-C
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP