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Assay category
4
Transcription
Assay
8
ChIP-seq
4
single cell RNA-seq
2
total RNA-seq
1
ATAC-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Organ
4
epithelium
4
pancreas
Life stage
4
adult
child
1
newborn
Available data
4
bam
4
bigWig
4
fastq
4
tsv
Platform
3
Illumina HiSeq 2500
1
Illumina NextSeq 500
Run type
3
single-ended
1
paired-ended
Read length (nt)
3
100
2
43
1
75
Library insert size (nt)
>200
1
>100
Library made from
4
RNA
Date released
3
April, 2018
1
June, 2018
Lab
4
AMP-T2D consortium
Replication type
3
anisogenic
1
unreplicated
files.read_length!
43
lab.title!
Kyle Gaulton, UCSD
replicates.library.biosample.life_stage!
child
replicates.library.size_range!
>200
Showing 4 of 4 results
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Experiment
TSTSR556659
released
single cell RNA-seq
of pancreatic ductal cell
Homo sapiens
pancreatic ductal cell female adult (38 years) and female adult (44 years) and male adult (21 year) and male adult (22 years) and male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR485851
released
single cell RNA-seq
of pancreatic ductal cell
Homo sapiens
pancreatic ductal cell female adult (37 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR504792
released
single cell RNA-seq
of pancreatic ductal cell
Homo sapiens
pancreatic ductal cell male adult (23 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR830402
released
single cell RNA-seq
of pancreatic ductal cell
Homo sapiens
pancreatic ductal cell female adult (39 years) and male adult (21 year) and male adult (52 years)
Lab:
AMP-T2D consortium
Project:
AMP