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Assay category
5
Transcription
Assay
111
ATAC-seq
48
pCHi-C
48
total RNA-seq
26
ChIP-seq
19
Hi-C
19
RRBS
12
snATAC-seq
10
MeRIP-seq
5
single cell RNA-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
DNase-seq
2
snDrop-seq
1
DNAme array
1
WGBS
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Organism
5
Homo sapiens
Biosample type
3
tissue
2
in vitro differentiated cells
Organ
1
heart
1
liver
1
musculature of body
Life stage
3
unknown
2
adult
Available data
67
tsv
bam
65
bigWig
59
fastq
1
csv
Platform
Illumina HiSeq 2500
Library made from
5
RNA
Date released
2
December, 2019
1
February, 2021
1
February, 2023
1
May, 2022
Lab
5
AMP-T2D consortium
Replication type
unreplicated
3
anisogenic
2
isogenic
Audit category:
2
audit script error
2
inconsistent ontology term
files.file_type!
bam
files.platform.term_name!
Illumina HiSeq 2500
Illumina NovaSeq 6000
replication_type!
unreplicated
Showing 5 of 5 results
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Experiment
DSR880DJB
released
single cell RNA-seq
of heart
Homo sapiens
heart female adult (47 years) and female adult (51 year) and female adult (52 years) and female adult (60 years) and male adult (39 years) and male adult (54 years) and male adult (59 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR946SNV
released
single cell RNA-seq
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR690SBQ
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR054HMA
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR373SNC
released
single cell RNA-seq
of liver
Homo sapiens
liver female adult (41 year) and male adult (21 year) and male adult (26 years) and male adult (44 years) and male adult (65 years)
Lab:
AMP-T2D consortium
Project:
AMP