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Assay category
6
Transcription
Assay
6
single cell RNA-seq
5
total RNA-seq
2
RNA microarray
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
6
Homo sapiens
Biosample type
3
primary cell
2
in vitro differentiated cells
1
tissue
Organ
1
epithelium
1
kidney
1
pancreas
Life stage
3
unknown
2
adult
1
child
1
newborn
Available data
5
tsv
3
bam
3
bigWig
3
fastq
Platform
1
Illumina HiSeq 2000
1
Illumina HiSeq 2500
1
Illumina NextSeq 500
Run type
2
single-ended
1
paired-ended
Read length (nt)
1
43
1
75
1
100
Library insert size (nt)
2
>100
Library made from
6
RNA
Date released
106
August, 2021
49
April, 2018
48
July, 2018
47
September, 2023
40
September, 2020
34
May, 2022
18
February, 2021
9
April, 2020
3
August, 2018
3
December, 2019
3
July, 2019
3
June, 2018
3
May, 2023
1
February, 2023
1
November, 2018
1
September, 2018
Lab
6
AMP-T2D consortium
Replication type
3
unreplicated
2
isogenic
1
anisogenic
Audit category:
3
inconsistent ontology term
2
audit script error
files.file_type!
tagAlign
month_released!
January, 2019
Showing 6 of 6 results
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Experiment
DSR690SBQ
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR054HMA
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR606NGC
released
single cell RNA-seq
of kidney
Homo sapiens
kidney
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR596173
released
single cell RNA-seq
of pancreatic cell
Homo sapiens
pancreatic cell male child (5 years) and male newborn (1 month)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR824095
released
Audit error
1
single cell RNA-seq
of unclassified exocrine cell
Homo sapiens
unclassified exocrine cell male adult (57 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR504792
released
single cell RNA-seq
of pancreatic ductal cell
Homo sapiens
pancreatic ductal cell male adult (23 years)
Lab:
AMP-T2D consortium
Project:
AMP