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Citing CMDGA
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Assay category
3
DNA accessibility
Assay
124
ChIP-seq
71
ATAC-seq
48
pCHi-C
18
total RNA-seq
6
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
single cell RNA-seq
3
CRISPR genome editing followed by DNA sequencing
3
snATAC-seq
2
Capture-C
2
HiChIP
2
RNA microarray
1
snDrop-seq
1
whole genome sequencing assay
Project
2
T1D
1
AMP
RFA
2
T1D
1
AMP
Experiment status
3
released
Genome assembly (visualization)
hg19
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Organ
2
blood
2
bodily fluid
1
pancreas
Life stage
63
adult
13
child
3
unknown
2
embryonic
1
newborn
Library made from
3
DNA
Date released
2
January, 2021
1
August, 2022
Lab
2
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Replication type
2
anisogenic
1
unreplicated
Audit category:
1
audit script error
assembly!
hg19
month_released!
December, 2017
organ_slims!
ovary
Showing 3 of 3 results
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Experiment
DSR260JLJ
released
Audit error
1
snATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR294OVU
released
snATAC-seq
of peripheral blood mononuclear cell
Homo sapiens
peripheral blood mononuclear cell male
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR247GCT
released
snATAC-seq
of peripheral blood mononuclear cell
Homo sapiens
peripheral blood mononuclear cell male
Lab:
Kyle Gaulton, UCSD
Project:
T1D