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Assay category
3
DNA accessibility
Assay
372
ChIP-seq
299
total RNA-seq
127
ATAC-seq
48
pCHi-C
19
DNase-seq
10
RRBS
9
Hi-C
6
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
single cell RNA-seq
3
snATAC-seq
2
HiChIP
2
RNA microarray
1
FAIRE-seq
1
snDrop-seq
1
whole genome sequencing assay
Project
2
T1D
1
AMP
RFA
2
T1D
1
AMP
Experiment status
3
released
Organism
3
Homo sapiens
Biosample type
2
primary cell
1
tissue
Organ
2
blood
2
bodily fluid
musculature of body
1
pancreas
Life stage
63
adult
13
child
3
unknown
2
embryonic
newborn
Library made from
3
DNA
Date released
2
January, 2021
1
August, 2022
Lab
2
Kyle Gaulton, UCSD
1
AMP-T2D consortium
Replication type
2
anisogenic
1
unreplicated
Audit category:
1
audit script error
organ_slims!
musculature of body
replicates.library.biosample.life_stage!
newborn
Showing 3 of 3 results
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Experiment
DSR260JLJ
released
Audit error
1
snATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR294OVU
released
snATAC-seq
of peripheral blood mononuclear cell
Homo sapiens
peripheral blood mononuclear cell male
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR247GCT
released
snATAC-seq
of peripheral blood mononuclear cell
Homo sapiens
peripheral blood mononuclear cell male
Lab:
Kyle Gaulton, UCSD
Project:
T1D