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Assay category
7
Transcription
Assay
17
ChIP-seq
7
total RNA-seq
4
ATAC-seq
2
Hi-C
pCHi-C
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
7
GRCh38
7
hg19
Organism
7
Homo sapiens
Biosample type
846
tissue
207
primary cell
52
cell line
7
in vitro differentiated cells
Organ
4
connective tissue
Life stage
86
unknown
43
embryonic
7
adult
Available data
7
bam
7
bigWig
7
tsv
1
fastq
Platform
1
Illumina HiSeq 2000
Run type
1
single-ended
Read length (nt)
1
100
Library insert size (nt)
1
225-275
Library made from
7
RNA
Date released
4
February, 2021
2
March, 2020
1
February, 2018
Lab
7
AMP-T2D consortium
Replication type
4
unreplicated
2
isogenic
1
anisogenic
Audit category:
2
inconsistent ontology term
assay_title!
pCHi-C
organ_slims!
brain
Showing 7 of 7 results
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Experiment
DSR717LDH
released
total RNA-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR048VZM
released
total RNA-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR558SOV
released
total RNA-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR215MUP
released
total RNA-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR748GIJ
released
Audit error
1
total RNA-seq
of lymphocyte of B lineage (iPSC)
Homo sapiens
lymphocyte of B lineage (iPSC)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR835LRF
released
Audit error
1
total RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR520282
released
total RNA-seq
of islet precursor cell
Homo sapiens
islet precursor cell
Lab:
AMP-T2D consortium
Project:
AMP