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Schema
Citing CMDGA
Clear Filters
Annotation type
3
gene expression
2
differential activity
Annotation Category
5
Gene expression levels
Annotation type Category
5
single cell RNA-seq
Available data
5
tsv
File set status
5
released
Organism
5
Homo sapiens
Biosample type
5
primary cell
Biosample term
66
stomach
56
kidney
52
brain
51
lung
50
muscle of arm
49
CD8-positive, alpha-beta T cell
47
adrenal gland
47
small intestine
45
placenta
44
A549
43
large intestine
42
muscle of leg
41
common myeloid progenitor, CD34-positive
41
muscle of back
39
left lung
39
liver
37
islet of Langerhans
37
thymus
35
retina
34
right lung
33
B cell
33
hematopoietic multipotent progenitor cell
31
monocyte
31
right kidney
30
renal cortex interstitium
30
renal pelvis
27
CD14-positive monocyte
27
left kidney
27
spinal cord
25
spleen
24
adipose tissue
24
neural progenitor cell
23
CD4-positive, alpha-beta memory T cell
23
regulatory T cell
22
adipocyte
21
MCF-7
21
endothelial cell
21
epithelial cell of proximal tubule
20
breast cancer cell
20
pigmented layer of retina
19
K562
19
glomerular endothelial cell
19
natural killer cell
19
pancreatic ductal cell
18
T-helper 1 cell
18
embryonic stem cell
18
foreskin keratinocyte
18
hepatocyte
17
T-helper 17 cell
17
foreskin fibroblast
17
sigmoid colon
17
trophoblast cell
16
EndoC_BH1
16
H1-hESC
16
induced pluripotent stem cell
16
ovary
15
CD8-positive, alpha-beta memory T cell
15
body of pancreas
15
keratinocyte
15
psoas muscle
14
endothelial cell of umbilical vein
14
gastrocnemius medialis
14
mesenchymal stem cell
14
mononuclear cell
14
pancreas
14
pancreatic alpha cell
14
tibial nerve
14
transverse colon
13
CD4-positive, alpha-beta T cell
13
cardiac muscle cell
13
pancreatic beta cell
13
pancreatic delta cell
13
skeletal muscle myoblast
13
skeletal muscle tissue
13
subcutaneous adipose tissue
13
testis
13
thyroid gland
13
upper lobe of left lung
12
T cell
12
T-helper 2 cell
12
fibroblast of lung
12
layer of hippocampus
12
mammary epithelial cell
12
muscle of trunk
12
neuroblastoma cell
12
neutrophil
12
osteoblast
12
retinal pigment epithelial cell
11
caudate nucleus
11
chorionic villus
11
macrophage
11
naive thymus-derived CD4-positive, alpha-beta T cell
10
HeLa-S3
10
Peyer's patch
10
Rhabdomyosarcoma
10
bronchial epithelial cell
10
endocrine pancreas
10
gastric cancer cell
10
mammary gland epithelial cell
10
neuronal stem cell
10
pancreatic acinar cell
10
progenitor cell of endocrine pancreas
10
prostate gland
9
GM12878
9
H9
9
HepG2
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
epithelial cell of prostate
9
fibroblast of dermis
9
glomerular visceral epithelial cell
9
liposarcoma
9
neurosphere
8
22Rv1
8
B-lymphoblastoid cell line
8
HEK293
8
aorta
8
breast epithelium
8
fibroblast
8
fibroblast cell line
8
left renal cortex interstitium
8
omental fat pad
8
pituitary stalk
8
right renal pelvis
8
smooth muscle cell
8
temporal lobe
8
trophoblast
7
GM12865
7
HT-29
7
cardiomyocytes (cardiac muscle cell)
7
colonic mucosa
7
esophageal adenocarcinoma
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
extended pluripotent stem (EPS) cells
7
left renal pelvis
7
lower leg skin
7
mature neutrophil
7
mesendoderm
7
substantia nigra
7
tibial artery
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
Ammon's horn
6
BE(2)-C
6
BJ cell
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM06990
6
GM12864
6
HAP-1
6
IMR-90
6
Jurkat
6
LNCAP
6
NAMALWA cell
6
SK-N-MC
6
cardiac precursors (cardiac muscle cell)
6
cerebellum
6
chondrocyte
6
choroid plexus epithelial cell
6
cingulate gyrus
6
endometrium adenocarcinoma
6
esophagus
6
eye
6
fibroblast of pulmonary artery
6
hESC cell
6
immortal human breast epithelial cell line cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neuroblastoma cell line
6
occipital lobe
6
pancreatic stellate cell
6
parathyroid adenoma
6
right renal cortex interstitium
6
skin fibroblast
6
thoracic aorta
6
tongue
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Daoy
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
Disease term
1
Acute kidney failure, unspecified
1
Chronic kidney disease (CKD)
1
acute kidney failure
1
chronic kidney disease
Organ
5
epithelium
5
kidney
Life stage
5
adult
Date released
5
September, 2023
Software used
3
r
2
deseq2
Lab
5
KPMP
Project
5
KPMP
RFA
5
KPMP
assembly!
GRCh38
organ_slims!
heart
software_used.software.name!
samtools
Showing 5 of 5 results
table-tab-icon
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Download
FileSet
DSR441ISG
released
Annotation file set
: Differential activity annotation of Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR708XZO
released
Annotation file set
: Differential activity annotation of Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell between AKI and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab:
KPMP
Project:
KPMP
FileSet
DSR168LGI
released
Annotation file set
: Gene expression annotation of Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell of healthy individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR273HUD
released
Annotation file set
: Gene expression annotation of Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell of CKD individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP
FileSet
DSR821VQF
released
Annotation file set
: Gene expression annotation of Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell of AKI individuals from KPMP scRNA-seq
Lab:
KPMP
Project:
KPMP