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Citing CMDGA
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Annotation type
1
variant allelic effects
Annotation Category
1
Genetic variant effects
Annotation type Category
1
ATAC-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
in vitro differentiated cells
Biosample term
25
adipose tissue
24
adipocyte
16
mesenchymal stem cell
14
subcutaneous adipose tissue
13
fibroblast of lung
13
osteoblast
11
fibroblast of cardiac tissue
10
fibroblast
10
omental fat pad
9
fibroblast of dermis
8
hepatic stellate cell
8
pancreatic stellate cell
8
skin fibroblast
7
chondrocyte
7
fibroblast of mammary gland
7
fibroblast of pulmonary artery
7
fibroblast of villous mesenchyme
6
GM23248
6
subcutaneous abdominal adipose tissue
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
Mesangial Cell
5
cardiac fibroblast
5
cartilage tissue
5
mesangial cell
4
adult endothelial progenitor cell
4
bone tissue
4
fibroblast of peridontal ligament
4
fibroblast of the conjunctiva
4
preadipocyte
3
HT1080
3
brain pericyte
3
fibroblast of gingiva
3
fibroblast of the aortic adventitia
3
pancreatic quiescent stellate cell
3
pericyte cell
3
pulmonary interstitial fibroblast
3
stromal cell of bone marrow
3
visceral abdominal adipose tissue
2
cardiac fibroblast
2
adipose tissue derived mesenchymal stem cell
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
articular chondrocyte
2
columnar chondrocyte
2
extracellular matrix secreting cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
embryonic fibroblast
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
1
white adipose cell
1
white adipose tissue
Organ
1
connective tissue
Date released
1
May, 2020
Software used
1
deltasvm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
assembly!
GRCh38
organ_slims!
penis
spinal cord
Showing 1 of 1 results
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Download
FileSet
DSR125CCG
released
Annotation file set
: Genetic variants with deltaSVM predictions in adipose SGBS ATAC-seq
Lab:
AMP-T2D consortium
Project:
AMP