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Getting started
Schema
Clear Filters
Annotation type
2
candidate regulatory elements
1
accessible chromatin
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
4
DNase-seq
3
ChIP-seq
Available data
4
bed bed3+
File set status
4
released
Genome assembly (visualization)
5
hg19
GRCh38
Organism
4
Homo sapiens
Biosample type
4
cell line
Biosample term
2636
whole blood
68
heart
66
stomach
56
kidney
52
brain
51
lung
50
muscle of arm
49
CD8-positive, alpha-beta T cell
49
endothelial cell
47
adrenal gland
47
small intestine
46
B cell
45
placenta
44
A549
43
large intestine
42
muscle of leg
41
common myeloid progenitor, CD34-positive
41
muscle of back
39
adipocyte
39
left lung
38
liver
37
islet of Langerhans
37
natural killer cell
37
thymus
35
monocyte
35
retina
34
right lung
33
hematopoietic multipotent progenitor cell
32
T cell
32
cardiac muscle cell
32
macrophage
31
right kidney
30
renal cortex interstitium
30
renal pelvis
30
smooth muscle cell
27
CD14-positive monocyte
27
left kidney
27
spinal cord
25
pancreatic ductal cell
25
spleen
24
adipose tissue
24
neural progenitor cell
23
CD4-positive, alpha-beta memory T cell
23
epithelial cell of proximal tubule
23
regulatory T cell
22
hepatocyte
21
EndoC_BH1
21
MCF-7
21
dendritic cell
21
heart left ventricle
21
neuron
20
breast cancer cell
20
pigmented layer of retina
19
K562
19
fibroblast
19
glomerular endothelial cell
18
T-helper 1 cell
18
embryonic stem cell
18
foreskin keratinocyte
18
pericyte
17
T-helper 17 cell
17
foreskin fibroblast
17
sigmoid colon
17
trophoblast cell
16
H1-hESC
16
induced pluripotent stem cell
16
ovary
15
CD8-positive, alpha-beta memory T cell
15
body of pancreas
15
keratinocyte
15
mesenchymal stem cell
15
psoas muscle
14
endothelial cell of umbilical vein
14
gastrocnemius medialis
14
mononuclear cell
14
pancreas
14
pancreatic alpha cell
14
tibial nerve
14
transverse colon
13
CD4-positive, alpha-beta T cell
13
heart right ventricle
13
pancreatic beta cell
13
pancreatic delta cell
13
skeletal muscle myoblast
13
skeletal muscle tissue
13
testis
13
thyroid gland
13
upper lobe of left lung
12
T-helper 2 cell
12
fibroblast of lung
12
layer of hippocampus
12
mammary epithelial cell
12
mast cell
12
muscle of trunk
12
neuroblastoma cell
12
neutrophil
12
osteoblast
12
retinal pigment epithelial cell
12
subcutaneous adipose tissue
11
caudate nucleus
11
chorionic villus
11
endothelial cell of lymphatic vessel
11
hepatic stellate cell
11
naive thymus-derived CD4-positive, alpha-beta T cell
10
HeLa-S3
10
Peyer's patch
10
Rhabdomyosarcoma
10
bronchial epithelial cell
10
endocrine pancreas
10
fibroblast of cardiac tissue
10
gastric cancer cell
10
mammary gland epithelial cell
10
neuronal stem cell
10
pancreatic acinar cell
10
progenitor cell of endocrine pancreas
10
prostate gland
9
GM12878
9
HepG2
9
cardiomyocytes
9
diffuse intrinsic pontine glioma
9
epithelial cell of prostate
9
fibroblast of dermis
9
glomerular visceral epithelial cell
9
liposarcoma
9
neurosphere
8
22Rv1
8
B-lymphoblastoid cell line
8
H9
8
aorta
8
breast epithelium
8
coronary artery
8
endocardial cell
8
fibroblast cell line
8
left renal cortex interstitium
8
omental fat pad
8
pituitary stalk
8
right atrium auricular region
8
right renal pelvis
8
temporal lobe
8
trophoblast
7
GM12865
7
HEK293
7
astrocyte
7
cardiomyocytes (cardiac muscle cell)
7
colonic mucosa
7
esophageal adenocarcinoma
7
esophagus muscularis mucosa
7
esophagus squamous epithelium
7
extended pluripotent stem (EPS) cells
7
left renal pelvis
7
leukocyte
7
lower leg skin
7
mature neutrophil
7
mesendoderm
7
skeletal muscle satellite cell
7
substantia nigra
7
tibial artery
6
AG04449 cell
6
AG04450 cell
6
AG09309 cell
6
AG09319 cell
6
AG10803 cell
6
Ammon's horn
6
BE(2)-C
6
BJ cell
6
CD1c-positive myeloid dendritic cell
6
CMK
6
Caco-2 cell
6
Chondroid Chordoma
6
GM06990
6
GM12864
6
HAP-1
6
HT-29
6
IMR-90
6
Jurkat
6
LNCAP
6
NAMALWA cell
6
SK-N-MC
6
cardiac precursors (cardiac muscle cell)
6
cerebellum
6
chondrocyte
6
choroid plexus epithelial cell
6
cingulate gyrus
6
endometrium adenocarcinoma
6
esophagus
6
eye
6
fibroblast of pulmonary artery
6
hESC cell
6
immortal human breast epithelial cell line cell
6
naive thymus-derived CD8-positive, alpha-beta T cell
6
neural cell
6
neuroblastoma cell line
6
occipital lobe
6
pancreatic A cell
6
pancreatic stellate cell
6
parathyroid adenoma
6
right renal cortex interstitium
6
skin fibroblast
6
thoracic aorta
6
tongue
Life stage
3
adult
Date released
2
September, 2022
1
February, 2021
1
June, 2020
Software used
2
r
1
encode-ccres
1
macs
Lab
4
AMP-T2D consortium
Project
4
AMP
Collection Tags
2
EpiMap
1
ChIP-Atlas
1
ENCODE
RFA
4
AMP
assembly!
GRCh38
Showing 4 of 4 results
table-tab-icon
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Download
FileSet
DSR478ZVG
released
Annotation file set
: Candidate regulatory elements for BSS00393 GM04503 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR673RUB
released
Annotation file set
: Target gene predictions for BSS00393 GM04503 from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR196ASD
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE GM04503
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR575BQJ
released
Annotation file set
: Accessible chromatin annotation for Epidermis GM04503 from ChIP-atlas
Lab:
AMP-T2D consortium
Project:
AMP