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Schema
Citing CMDGA
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Assay category
3
DNA accessibility
1
DNA binding
1
DNA methylation
Assay
3
ATAC-seq
1
ChIP-seq
1
WGBS
1
pCHi-C
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
386
hg19
GRCh38
Organism
6
Homo sapiens
Target of assay
1
control
Biosample type
6
tissue
Organ
6
adipose tissue
6
connective tissue
Life stage
4
unknown
2
adult
Available data
2
bigWig
2
fastq
1
bam
1
bed narrowPeak
1
bigBed narrowPeak
1
tsv
Platform
1
Illumina HiSeq 2000
1
Illumina HiSeq 2500
Run type
2
single-ended
Read length (nt)
1
36
1
100
Mapped read length (nt)
1
36
Library made from
6
DNA
Date released
2
August, 2017
1
February, 2023
1
January, 2018
1
March, 2020
1
October, 2019
Lab
6
AMP-T2D consortium
Replication type
3
anisogenic
3
unreplicated
assembly!
GRCh38
month_released!
April, 2020
June, 2019
Showing 6 of 6 results
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Experiment
DSR512DPA
released
ATAC-seq
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR437GEP
released
pCHi-C
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR543YBS
released
ATAC-seq
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR511851
released
ATAC-seq
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR430639
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR560677
released
ChIP-seq
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP