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Schema
Citing CMDGA
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Annotation type
3
candidate regulatory elements
1
gene expression
Annotation Category
3
cis-regulatory elements
1
Gene expression levels
Annotation type Category
3
ChIP-seq
3
DNase-seq
1
RNA-seq
Available data
3
bed bed3+
1
tsv
File set status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
in vitro differentiated cells
Biosample term
66
heart
37
islet of Langerhans
22
heart left ventricle
20
EndoC_BH1
19
pancreatic ductal cell
16
body of pancreas
16
pancreas
14
pancreatic alpha cell
14
pancreatic beta cell
14
pancreatic delta cell
13
heart right ventricle
12
pancreatic acinar cell
11
endocrine pancreas
11
fibroblast of cardiac tissue
10
right atrium auricular region
9
coronary artery
8
pancreatic stellate cell
6
pancreatic polypeptide-secreting cell
5
left cardiac atrium
5
right cardiac atrium
5
smooth muscle cell of the coronary artery
4
Panc1
4
cardiac fibroblast
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
3
pancreatic quiescent stellate cell
2
8988T
2
HPDE6-E6E7
2
cardiac muscle myoblast
2
endothelial cell of coronary artery
2
pancreatic endocrine cell
1
activated pancreatic stellate cell
1
aortic valve
1
cardiac atrium fibroblast
1
cardiac ventricle
1
cardiac ventricle fibroblast
1
left ventricle myocardium
1
mitral valve
1
pancreatic A cell
1
pulmonary valve
1
quiescent pancreatic stellate cell
1
tricuspid valve
1
type B pancreatic cell
Organ
5
connective tissue
4
heart
1
brain
1
vasculature
0
pancreas
Life stage
1
adult
1
embryonic
1
unknown
Date released
3
February, 2021
1
May, 2021
Software used
3
encode-ccres
1
r
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
assembly!
GRCh38
organ_slims!
lung
Showing 4 of 4 results
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Download
FileSet
DSR297QYL
released
Annotation file set
: Gene expression annotation of fibroblast ISL1-Lineage marker- on day 10 from embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR892JZJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR336NCR
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR656QGJ
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP