Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
2
gene expression
1
accessible chromatin
1
target gene predictions
Annotation Category
2
Gene expression levels
1
Target gene links
1
cis-regulatory elements
Annotation type Category
2
single cell RNA-seq
2
snATAC-seq
Available data
2
bed bed3+
2
tsv
1
bigWig
File set status
4
released
Genome assembly (visualization)
GRCh38
6
hg19
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
11
pancreatic alpha cell
11
pancreatic beta cell
11
pancreatic delta cell
7
pancreatic acinar cell
7
pancreatic ductal cell
7
pancreatic stellate cell
5
pancreatic endothelial cell
4
endothelial cell
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
pancreatic polypeptide-secreting cell
3
B cell
3
endothelial cell of lymphatic vessel
3
macrophage
3
natural killer cell
3
pancreatic quiescent stellate cell
2
CD8-positive, alpha-beta T cell
2
activated CD4-positive, alpha-beta T cell
2
activated CD8-positive, alpha-beta T cell
2
adipocyte
2
conventional dendritic cell
2
endocardial cell
2
fibroblast
2
islet of Langerhans
2
megakaryocyte
2
memory B cell
2
monocyte
2
naive B cell
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
naive thymus-derived CD8-positive, alpha-beta T cell
2
natural killer cell mediated cytotoxicity
2
neuronal stem cell
2
non-classical monocyte
2
plasmacytoid dendritic cell
2
regulatory T cell
2
stellate neuron
1
Pancreatic islets
1
erythrocyte
1
hepatic stellate cell
1
mast cell
1
myofibroblast cell
1
pancreatic immune cell
1
purified protein and synthetic DNA oligo binding assay
1
regular ventricular cardiac myocyte
1
smooth muscle cell
Disease term
2
heart failure
Organ
4
epithelium
Life stage
2
adult
Date released
2
January, 2021
2
May, 2024
Software used
1
cicero
1
macs
Lab
10
AMP-T2D consortium
4
Katalin Susztak, Upenn
4
Kyle Gaulton, UCSD
4
Stephen Parker, UMich
2
Bing Ren, UCSD
Project
2
AMP
2
T1D
RFA
2
AMP2
2
T1D
assembly!
GRCh38
biosample_term_name!
GM12865
left renal pelvis
Showing 4 of 4 results
table-tab-icon
matrix-icon
Download
FileSet
DSR953NXN
released
Annotation file set
: Gene expression annotation for scRNA-seq of Endothelial from RV
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR896UDE
released
Annotation file set
: Gene expression annotation for scRNA-seq of Endothelial from LV
Lab:
Kyle Gaulton, UCSD
Project:
AMP
FileSet
DSR305VNP
released
Annotation file set
: coaccessible target genes annotation from snATAC-seq of endothelial
Lab:
Kyle Gaulton, UCSD
Project:
T1D
FileSet
DSR579LZJ
released
Annotation file set
: accessible chromatin annotation from snATAC-seq of endothelial
Lab:
Kyle Gaulton, UCSD
Project:
T1D