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Schema
Citing CMDGA
Clear Filters
Annotation type
4
candidate regulatory elements
3
target gene predictions
Annotation Category
4
cis-regulatory elements
3
Target gene links
Annotation type Category
7
DNase-seq
6
ChIP-seq
1
ATAC-seq
1
H3K27ac ChIP-Seq
Available data
7
bed bed3+
File set status
7
released
Genome assembly (visualization)
9
hg19
GRCh38
Organism
7
Homo sapiens
Biosample type
7
primary cell
3
cell line
Biosample term
48
CD8-positive, alpha-beta T cell
41
common myeloid progenitor, CD34-positive
30
monocyte
29
B cell
27
CD14-positive monocyte
23
CD4-positive, alpha-beta memory T cell
23
regulatory T cell
21
endothelial cell
21
epithelial cell of proximal tubule
19
T-helper 1 cell
19
glomerular endothelial cell
17
T-helper 17 cell
17
natural killer cell
16
hepatocyte
15
CD8-positive, alpha-beta memory T cell
15
foreskin fibroblast
15
foreskin keratinocyte
15
pancreatic ductal cell
14
mononuclear cell
14
pancreatic alpha cell
14
pancreatic beta cell
14
pancreatic delta cell
14
skeletal muscle myoblast
14
trophoblast cell
13
CD4-positive, alpha-beta T cell
13
T-helper 2 cell
13
fibroblast of lung
13
mammary epithelial cell
13
naive thymus-derived CD4-positive, alpha-beta T cell
13
osteoblast
12
neutrophil
11
T cell
11
keratinocyte
11
pancreatic acinar cell
10
bronchial epithelial cell
10
glomerular visceral epithelial cell
10
neurosphere
9
fibroblast of dermis
9
macrophage
9
mature neutrophil
8
mammary gland epithelial cell
8
naive thymus-derived CD8-positive, alpha-beta T cell
8
pancreatic stellate cell
7
epithelial cell of prostate
7
fibroblast
7
fibroblast of mammary gland
7
fibroblast of villous mesenchyme
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
kidney tubule cell
7
memory B cell
7
retinal pigment epithelial cell
7
skeletal muscle satellite cell
7
smooth muscle cell
6
CD1c-positive myeloid dendritic cell
6
T-cell
6
alternatively activated macrophage
6
astrocyte
6
cardiac muscle cell
6
erythroblast
6
fibroblast of breast
6
fibroblast of cardiac tissue
6
gamma-delta T cell
6
hepatic stellate cell
6
kidney glomerular epithelial cell
6
mesenchymal stem cell
6
myoepithelial cell of mammary gland
6
naive B cell
6
naive T cell
6
pancreatic polypeptide-secreting cell
6
peripheral blood mononuclear cell
6
renal cortical epithelial cell
6
skeletal muscle fiber
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
central memory CD8-positive, alpha-beta T cell
5
choroid plexus epithelial cell
5
effector memory CD8-positive, alpha-beta T cell
5
epithelial cell of esophagus
5
foreskin melanocyte
5
inflammatory macrophage
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
myofibroblast cell
5
skin fibroblast
5
tracheal epithelial cell
5
type I muscle cell
5
type II muscle cell
4
T follicular helper cell
4
acute myeloid leukemia cell
4
adult endothelial progenitor cell
4
aortic adventitial fibroblast
4
astrocyte of the cerebellum
4
astrocyte of the hippocampus
4
cardiac fibroblast
4
dermis lymphatic vessel endothelial cell
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
fibroblast of peridontal ligament
4
glutamatergic neuron
4
iris pigment epithelial cell
4
kidney connecting tubule epithelial cell
4
leukocyte
4
lung microvascular endothelial cell
4
mast cell
4
mature natural killer cell
4
memory T cell
4
memory regulatory T cell
4
nephron progenitor
4
non-pigmented ciliary epithelial cell
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
plasma cell
4
preadipocyte
4
renal epithelial cell
4
skeletal muscle cell
4
smooth muscle cell of the brain vasculature
4
vascular associated smooth muscle cell
3
Cycling Mononuclear Phagocyte
3
Ishikawa
3
Mast Cell
3
S-shaped body
3
Schwann cell
3
Th1 cell
3
Th17 cell
3
activated CD4-positive, alpha-beta T cell
3
adipocyte
3
astrocyte of the spinal cord
3
basal cell
3
bone marrow cell
3
enterocyte
3
erythroid cell
3
fibroblast of gingiva
3
fibroblast of the conjunctiva
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
megakaryocyte
3
meso-epithelial cell
3
mononuclear cell of bone marrow
Organ
7
epithelium
7
prostate gland
Life stage
6
unknown
Date released
4
September, 2022
2
February, 2021
1
May, 2021
Software used
4
r
2
encode-ccres
1
abc
Lab
6
AMP-T2D consortium
1
Jesse Engreitz, Stanford University
Project
7
AMP
RFA
7
AMP
assembly!
GRCh38
organ_slims!
blood vessel
Showing 7 of 7 results
table-tab-icon
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Download
FileSet
DSR374VHN
released
Annotation file set
: Candidate regulatory elements for BSS00309 epithelial cell of prostate from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR286WGH
released
Annotation file set
: Candidate regulatory elements for BSS00308 epithelial cell of prostate from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR120KRM
released
Annotation file set
: Target gene predictions for BSS00309 epithelial cell of prostate from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR498KQI
released
Annotation file set
: Target gene predictions for BSS00308 epithelial cell of prostate from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR113LMW
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE epithelial cell of prostate
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR965YPT
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE epithelial cell of prostate
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR327KAR
released
Annotation file set
: enhancer-gene predicton of epithelial_cell_of_prostate-ENCODE from Broad ABC data
Lab:
Jesse Engreitz, Stanford University
Project:
AMP