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Schema
Citing CMDGA
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Annotation type
1
candidate regulatory elements
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
Biosample term
48
CD8-positive, alpha-beta T cell
30
monocyte
21
endothelial cell
19
CD14-positive monocyte
19
epithelial cell of proximal tubule
17
glomerular endothelial cell
17
regulatory T cell
15
common myeloid progenitor, CD34-positive
15
pancreatic ductal cell
14
hepatocyte
13
B cell
13
CD4-positive, alpha-beta T cell
13
T-helper 1 cell
13
foreskin fibroblast
13
mammary epithelial cell
13
naive thymus-derived CD4-positive, alpha-beta T cell
13
pancreatic alpha cell
13
pancreatic beta cell
12
pancreatic delta cell
11
T-helper 17 cell
11
endothelial cell of umbilical vein
11
natural killer cell
11
osteoblast
11
pancreatic acinar cell
10
skeletal muscle myoblast
9
macrophage
9
mature neutrophil
8
glomerular visceral epithelial cell
8
naive thymus-derived CD8-positive, alpha-beta T cell
8
neutrophil
8
pancreatic stellate cell
7
T-helper 2 cell
7
fibroblast
7
fibroblast of lung
7
foreskin keratinocyte
7
keratinocyte
7
kidney interstitial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
memory B cell
7
smooth muscle cell
6
T-cell
6
alternatively activated macrophage
6
bronchial epithelial cell
6
cardiac muscle cell
6
erythroblast
6
gamma-delta T cell
6
mesenchymal stem cell
naive B cell
6
pancreatic polypeptide-secreting cell
6
peripheral blood mononuclear cell
6
skeletal muscle fiber
6
trophoblast cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
CD14-positive, CD16-negative classical monocyte
5
CD4-positive, alpha-beta memory T cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
central memory CD8-positive, alpha-beta T cell
5
effector memory CD8-positive, alpha-beta T cell
5
fibroblast of mammary gland
5
fibroblast of pulmonary artery
5
fibroblast of villous mesenchyme
5
inflammatory macrophage
5
kidney cortex collecting duct principal cell
5
kidney distal convoluted tubule epithelial cell
5
kidney loop of Henle thick ascending limb epithelial cell
5
mesangial cell
5
myofibroblast cell
5
pancreatic endothelial cell
5
retinal pigment epithelial cell
5
skeletal muscle satellite cell
5
tracheal epithelial cell
5
type I muscle cell
5
type II muscle cell
4
CD1c-positive myeloid dendritic cell
4
T follicular helper cell
4
acute myeloid leukemia cell
4
adult endothelial progenitor cell
4
aortic adventitial fibroblast
4
astrocyte
4
cardiac fibroblast
4
dermis blood vessel endothelial cell
4
effector CD4-positive, alpha-beta T cell
4
effector T cell
4
glutamatergic neuron
4
hepatic stellate cell
4
kidney connecting tubule epithelial cell
4
kidney glomerular epithelial cell
4
leukocyte
4
mast cell
4
mature natural killer cell
4
memory T cell
4
memory regulatory T cell
4
nephron progenitor
4
neurosphere
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
plasma cell
4
preadipocyte
4
pulmonary artery endothelial cell
4
renal cortical epithelial cell
4
renal epithelial cell
4
vascular associated smooth muscle cell
3
Cycling Mononuclear Phagocyte
3
Ishikawa
3
Mast Cell
3
S-shaped body
3
Schwann cell
3
T cell
3
Th1 cell
3
Th17 cell
3
activated CD4-positive, alpha-beta T cell
3
adipocyte
3
basal cell
3
bone marrow cell
3
choroid plexus epithelial cell
3
enterocyte
3
epithelial cell of esophagus
3
epithelial cell of prostate
3
erythroid cell
3
fibroblast of dermis
3
foreskin melanocyte
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney epithelial cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
kidney tubule cell
3
megakaryocyte
3
meso-epithelial cell
3
mononuclear cell of bone marrow
3
myotube
3
naive regulatory T cell
3
neoplastic cell
3
pancreatic quiescent stellate cell
3
peripheral blood stem cell
3
plasmacytoid dendritic cell
3
pre-B acute lymphoblastic leukemia cell
3
pulmonary interstitial fibroblast
2
cardiac fibroblast
2
Adipose stromal cell
2
B-lymphocyte
Organ
1
blood vessel
1
connective tissue
1
vasculature
Life stage
1
unknown
Date released
September, 2022
1
February, 2021
Software used
1
encode-ccres
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
assembly!
GRCh38
biosample_term_name!
naive B cell
month_released!
September, 2022
Showing 1 of 1 results
table-tab-icon
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Download
FileSet
DSR761GFE
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE fibroblast of the aortic adventitia
Lab:
AMP-T2D consortium
Project:
AMP