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Citing CMDGA
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Assay category
2
3D chromatin structure
1
DNA accessibility
Assay
2
Hi-C
1
FAIRE-seq
Project
3
AMP
RFA
2
AMP
1
AMP2
Experiment status
3
released
Genome assembly (visualization)
4
hg19
GRCh38
Organism
3
Homo sapiens
Biosample type
3
tissue
Organ
3
pancreas
Life stage
2
adult
1
unknown
Available data
31
bam
31
fastq
25
bed narrowPeak
9
bigWig
9
tagAlign
7
bed broadPeak
6
txt
2
bedpe bed3+
2
hic
2
tsv
1
bed bedMethyl
1
bedpe
1
bigBed bedMethyl
1
bigBed narrowPeak
Platform
1
Illumina Genome Analyzer I
Run type
1
single-ended
Read length (nt)
1
35
Library made from
3
DNA
Date released
1
August, 2017
1
March, 2019
1
November, 2019
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
2
unreplicated
1
anisogenic
assembly!
GRCh38
month_released!
May, 2019
Showing 3 of 3 results
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Experiment
DSR951IJE
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (43 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR043623
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (56 years) and female adult (59 years) and male adult (53 years)
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
TSTSR121227
released
FAIRE-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (53 years)
Lab:
AMP-T2D consortium
Project:
AMP