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Schema
Citing CMDGA
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Assay category
2
DNA accessibility
2
DNA binding
1
DNA methylation
Assay
2
ChIP-seq
2
DNase-seq
1
RRBS
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
19
hg19
GRCh38
Organism
5
Homo sapiens
Target of assay
1
RNA binding protein
1
control
1
transcription factor
Biosample type
5
primary cell
Life stage
5
unknown
Available data
4
bam
4
bigWig
4
fastq
3
bed narrowPeak
3
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tagAlign
Platform
3
Illumina Genome Analyzer IIx
1
Illumina Genome Analyzer II
1
Illumina Genome Analyzer IIe
1
Illumina HiSeq 2000
Run type
4
single-ended
1
paired-ended
Read length (nt)
4
36
1
101
Library made from
5
DNA
Date released
5
August, 2017
Lab
5
AMP-T2D consortium
Replication type
5
isogenic
assembly!
GRCh38
organ_slims!
brain
Showing 5 of 5 results
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Experiment
TSTSR251267
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR986440
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR288454
released
RRBS
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR132965
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR633851
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP