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Schema
Citing CMDGA
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Annotation type
2
candidate regulatory elements
1
target gene predictions
Annotation Category
2
cis-regulatory elements
1
Target gene links
Annotation type Category
3
ChIP-seq
3
DNase-seq
Available data
3
bed bed3+
File set status
3
released
Genome assembly (visualization)
4
hg19
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
25
adipose tissue
24
adipocyte
17
foreskin fibroblast
16
mesenchymal stem cell
14
subcutaneous adipose tissue
13
fibroblast of lung
13
osteoblast
11
fibroblast of cardiac tissue
10
fibroblast
10
omental fat pad
9
fibroblast of dermis
8
hepatic stellate cell
8
pancreatic stellate cell
8
skin fibroblast
7
chondrocyte
7
fibroblast of mammary gland
7
fibroblast of pulmonary artery
7
fibroblast of villous mesenchyme
6
GM23248
6
subcutaneous abdominal adipose tissue
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Fibroblast
5
Mesangial Cell
5
cardiac fibroblast
5
cartilage tissue
5
mesangial cell
4
adult endothelial progenitor cell
4
bone tissue
4
fibroblast of peridontal ligament
4
fibroblast of the conjunctiva
4
preadipocyte
3
HT1080
3
brain pericyte
3
fibroblast of gingiva
3
fibroblast of the aortic adventitia
3
pancreatic quiescent stellate cell
3
pericyte cell
3
pulmonary interstitial fibroblast
3
stromal cell of bone marrow
3
visceral abdominal adipose tissue
2
cardiac fibroblast
2
adipose tissue derived mesenchymal stem cell
2
amnion mesenchymal stem cell
2
amniotic stem cell
2
articular chondrocyte
2
columnar chondrocyte
2
extracellular matrix secreting cell
1
omental fat pad
1
Adipose SGBS cell line (adipocyte)
1
Human Mesenchymal Cell derived Adipocytes
1
Human Mesenchymal Cell derived Osteoblasts
1
Preadipose SGBS cell line (adipocyte)
1
SGBS preadipocytes
1
activated pancreatic stellate cell
1
adipose-derived mesenchymal stem cell
1
beige adipocyte
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
dedifferentiated amniotic fluid mesenchymal stem cell
embryonic fibroblast
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
kidney interstitial fibroblast
1
mesenchymal stem cell of adipose
1
pericardium fibroblast
1
quiescent pancreatic stellate cell
1
white adipose cell
1
white adipose tissue
Organ
3
bone element
3
bone marrow
3
connective tissue
Life stage
3
unknown
Date released
2
September, 2022
1
February, 2021
Software used
2
r
1
encode-ccres
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
assembly!
GRCh38
biosample_term_name!
embryonic fibroblast
Showing 3 of 3 results
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Download
FileSet
DSR748MDW
released
Annotation file set
: Candidate regulatory elements for BSS01661 stromal cell of bone marrow from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR928GVV
released
Annotation file set
: Target gene predictions for BSS01661 stromal cell of bone marrow from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR880WUR
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE stromal cell of bone marrow
Lab:
AMP-T2D consortium
Project:
AMP