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Schema
Citing CMDGA
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Assay category
2
DNA accessibility
1
DNA binding
Assay
2
DNase-seq
1
ChIP-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
47
hg19
GRCh38
Organism
3
Homo sapiens
Target of assay
1
RNA binding protein
1
transcription factor
Biosample type
3
primary cell
Life stage
32
child
3
unknown
1
newborn
Available data
15
bigWig
11
bed bedMethyl
11
bigBed bedMethyl
8
bam
8
tsv
7
bed narrowPeak
5
fastq
4
bed bed3+
4
hdf5
3
bed bedgraph
3
bigBed narrowPeak
3
txt
2
bed broadPeak
2
bedpe bed3+
2
bigBed broadPeak
2
hic
1
tagAlign
Platform
1
Illumina Genome Analyzer II
1
Illumina Genome Analyzer IIe
1
Illumina Genome Analyzer IIx
1
Illumina HiSeq 2000
Run type
2
single-ended
1
paired-ended
Read length (nt)
2
36
1
101
Library made from
3
DNA
Date released
3
August, 2017
Lab
3
AMP-T2D consortium
Replication type
3
anisogenic
3
isogenic
1
unreplicated
assembly!
GRCh38
Showing 3 of 3 results
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Experiment
TSTSR251267
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR986440
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR132965
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP