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Schema
Citing CMDGA
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Annotation type
1
candidate regulatory elements
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
Organism
1
Homo sapiens
Biosample type
1
primary cell
0
tissue
Biosample term
128
monocyte
90
heart
86
stomach
73
brain
68
lung
67
muscle of arm
66
kidney
63
small intestine
62
adrenal gland
60
placenta
58
muscle of leg
56
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
48
liver
48
thymus
45
CD8-positive, alpha-beta T cell
45
right lung
44
islet of Langerhans
42
right kidney
40
renal cortex interstitium
40
renal pelvis
40
retina
36
B cell
36
left kidney
34
heart left ventricle
34
spleen
32
CD4-positive, alpha-beta memory T cell
32
adipose tissue
31
CD14-positive monocyte
31
spinal cord
26
regulatory T cell
25
tibial nerve
24
body of pancreas
23
T-helper 1 cell
23
sigmoid colon
22
CD8-positive, alpha-beta memory T cell
22
caudate nucleus
22
epithelial cell of proximal tubule
22
pancreas
21
coronary artery
21
hepatocyte
21
ovary
20
T-helper 17 cell
20
endothelial cell of umbilical vein
20
glomerular endothelial cell
20
mononuclear cell
20
pigmented layer of retina
20
psoas muscle
20
subcutaneous adipose tissue
19
foreskin keratinocyte
19
heart right ventricle
19
right atrium auricular region
19
thyroid gland
19
tibial artery
19
transverse colon
18
gastrocnemius medialis
18
substantia nigra
18
testis
18
trophoblast cell
17
T-helper 2 cell
17
muscle of trunk
17
natural killer cell
17
omental fat pad
17
osteoblast
16
T cell
16
ascending aorta
16
cerebellum
16
chorionic villus
16
fibroblast of lung
16
foreskin fibroblast
16
frontal cortex
16
layer of hippocampus
16
pancreatic ductal cell
16
skeletal muscle myoblast
16
skeletal muscle tissue
16
upper lobe of left lung
15
endocrine pancreas
15
neutrophil
15
putamen
14
Peyer's patch
14
prostate gland
14
temporal lobe
13
CD4-positive, alpha-beta T cell
13
aorta
13
endothelial cell
13
keratinocyte
13
macrophage
13
mammary epithelial cell
13
neurosphere
12
Ammon's horn
12
bronchial epithelial cell
12
fibroblast of dermis
12
left cardiac atrium
12
left renal cortex interstitium
12
left renal pelvis
12
naive thymus-derived CD4-positive, alpha-beta T cell
12
pancreatic beta cell
12
right renal pelvis
11
breast epithelium
11
esophagus muscularis mucosa
11
esophagus squamous epithelium
11
mammary gland epithelial cell
11
pancreatic acinar cell
11
pancreatic alpha cell
11
right renal cortex interstitium
11
thoracic aorta
11
trophoblast
10
angular gyrus
10
chorion membrane
10
colonic mucosa
10
dermis blood vessel endothelial cell
10
esophagus
10
glomerular visceral epithelial cell
10
kidney tubule cell
10
lower leg skin
10
pancreatic delta cell
10
vagina
9
cingulate gyrus
9
duodenal mucosa
9
epithelial cell of prostate
9
eye
9
fibroblast
9
fibroblast of cardiac tissue
9
mature neutrophil
9
mucosa of rectum
9
naive T cell
9
parathyroid adenoma
9
retinal pigment epithelial cell
9
right lobe of liver
9
stomach smooth muscle
9
tongue
9
uterus
8
astrocyte
8
fibroblast of breast
8
fibroblast of mammary gland
8
fibroblast of pulmonary artery
8
fibroblast of villous mesenchyme
8
globus pallidus
8
hepatic stellate cell
8
kidney glomerular epithelial cell
8
limb
8
midbrain
8
muscle layer of colon
8
muscle layer of duodenum
8
myoepithelial cell of mammary gland
8
occipital lobe
8
pancreatic stellate cell
8
renal cortical epithelial cell
8
right cardiac atrium
8
urinary bladder
7
CD1c-positive myeloid dendritic cell
7
amygdala
7
cardiac muscle cell
7
choroid plexus epithelial cell
7
gastroesophageal sphincter
7
hypothalamus
7
kidney epithelial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
naive thymus-derived CD8-positive, alpha-beta T cell
7
nucleus accumbens
7
pulmonary artery endothelial cell
7
skeletal muscle satellite cell
7
skin fibroblast
7
superior temporal gyrus
6
Brodmann (1909) area 46
6
T-cell
6
anterior cingulate cortex
6
astrocyte of the cerebellum
6
astrocyte of the hippocampus
6
cerebellum (Hemisphere)
6
dermis lymphatic vessel endothelial cell
6
epithelial cell of esophagus
6
erythroblast
6
foreskin melanocyte
6
gamma-delta T cell
6
kidney interstitial cell
6
medulla oblongata
6
middle frontal gyrus
6
olfactory receptor cell
6
peripheral blood mononuclear cell
6
pons
6
skeletal muscle cell
6
skin of body
6
smooth muscle cell of the brain vasculature
6
subcutaneous abdominal adipose tissue
6
umbilical cord
5
cardiac fibroblast
5
C1 segment of cervical spinal cord
5
CD14-positive, CD16-negative classical monocyte
5
T follicular helper cell
5
alternatively activated macrophage
5
brain microvascular endothelial cell
5
central memory CD8-positive, alpha-beta T cell
5
cerebellar cortex
5
effector memory CD8-positive, alpha-beta T cell
5
fibroblast of peridontal ligament
5
fibroblast of the aortic adventitia
5
gastrocnemius medialis(Muscle - Skeletal)
Organ
1
epithelium
1
extraembryonic component
Life stage
1
unknown
Date released
1
February, 2021
Software used
1
encode-ccres
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
assembly!
hg18
Showing 1 of 1 results
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Download
FileSet
DSR367ITG
released
Annotation file set
: Registry of candidate cis-Regulatory Elements (cCREs) derived from ENCODE amniotic epithelial cell
Lab:
AMP-T2D consortium
Project:
AMP