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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
gene expression
Annotation Category
1
Gene expression levels
1
cis-regulatory elements
Annotation type Category
1
DNase-seq
1
RNA-seq
Available data
1
bed bed3+
1
bigWig
1
tsv
File set status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Biosample type
2
tissue
Biosample term
3
cardiac fibroblast
2
Ammon's horn
2
SGBS preadipocytes
2
aorta
2
brain
2
cardiac muscle cell
2
caudate nucleus
2
coronary artery
2
endothelial cell of umbilical vein
2
frontal cortex
2
heart
2
heart left ventricle
2
kidney
2
omental fat pad
2
pancreas
2
putamen
2
right atrium auricular region
2
tibial artery
1
hindlimb muscle
1
C1 segment of cervical spinal cord
1
adipose tissue
1
adrenal gland
1
amygdala
1
anterior cingulate cortex
1
ascending aorta
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
bladder
1
body of pancreas
1
brain microvascular endothelial cell
1
brain pericyte
1
breast - mammary tissue
1
cells - EBV-transformed lymphocytes
1
cells - cultured fibroblasts
1
cerebellar cortex
1
cerebellum
1
cerebellum (Hemisphere)
1
cervix - ectocervix
1
cervix - endocervix
1
choroid plexus epithelial cell
1
colon - sigmoid
1
colon - transverse
1
epithelial cell of proximal tubule
1
esophagus - gastroesophageal junction
1
esophagus - mucosa
1
esophagus - muscularis
1
fallopian tube
1
fetal heart
1
forelimb muscle
1
globus pallidus
1
glomerular endothelial cell
1
glomerular visceral epithelial cell
1
heart right ventricle
1
hepatic stellate cell
1
hepatocyte
1
hypothalamus
1
islet of Langerhans
1
kidney - cortex
1
kidney - medulla
1
kidney capillary endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
left cardiac atrium
1
left renal pelvis
1
lung
1
middle frontal gyrus
1
minor salivary gland
1
muscle of arm
1
muscle of leg
1
nucleus accumbens
1
occipital lobe
1
ovary
1
pituitary
1
pons
1
prostate
1
renal cortex interstitium
1
renal cortical epithelial cell
1
renal pelvis
1
retina
1
retinal pigment epithelial cell
1
right cardiac atrium
1
right lobe of liver
1
right renal pelvis
1
skeletal muscle cell
1
skin - not sun exposed (suprapubic)
1
skin - sun exposed (lower leg)
1
small intestine - terminal Ileum
1
smooth muscle cell of the brain vasculature
1
spleen
1
stomach
1
subcutaneous adipose tissue
1
substantia nigra
1
superior temporal gyrus
1
testis
1
thyroid
1
tibial nerve
1
uterus
1
vagina
1
whole blood
Organ
2
brain
Life stage
2
adult
Date released
9
September, 2022
3
February, 2021
3
March, 2020
2
January, 2020
1
August, 2017
1
February, 2020
1
January, 2022
1
June, 2020
1
May, 2020
0
March, 2024
Software used
1
macs
1
r
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
assembly!
hg18
month_released!
February, 2024
Showing 2 of 2 results
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Download
FileSet
DSR253KNV
released
Annotation file set
: Gene expression summary of TPM of brain caudate basal ganglia from GTEx V8
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR775JNR
released
Annotation file set
: Accessible chromatin annotation of brain caudate nucleus from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP