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Schema
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Annotation type
1
eQTL
Annotation Category
1
Genetic variant effects
Annotation type Category
1
RNA-seq
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
hg19
16
GRCh38
Organism
1
Homo sapiens
Biosample type
1
tissue
Biosample term
2636
whole blood
38
endothelial cell
30
macrophage
23
T cell
23
monocyte
21
natural killer cell
21
smooth muscle cell
20
islet of Langerhans
19
pericyte
18
epithelial cell of proximal tubule
18
neuron
17
adipocyte
17
cardiac muscle cell
17
hepatocyte
16
induced pluripotent stem cell
15
B cell
15
dendritic cell
15
glomerular endothelial cell
15
pancreatic ductal cell
12
endothelial cell of lymphatic vessel
12
fibroblast
11
EndoC_BH1
11
cardiomyocytes
11
mast cell
10
endocardial cell
9
extended pluripotent stem (EPS) cells
9
progenitor cell of endocrine pancreas
9
regulatory T cell
8
H1-hESC
8
T-helper 1 cell
8
T-helper 17 cell
8
neural progenitor cell
7
kidney
7
kidney loop of Henle thick ascending limb epithelial cell
7
kidney loop of Henle thin ascending limb epithelial cell
7
subcutaneous adipose tissue
6
acinar cell
6
hepatic stellate cell
6
kidney connecting tubule epithelial cell
6
kidney interstitial cell
6
lymphoblastoid cell line
6
pancreatic A cell
6
pancreatic acinar cell
6
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic delta cell
6
type B pancreatic cell
5
Adaptive / Maladaptive / Repairing Fibroblast
5
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
5
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
5
Afferent / Efferent Arteriole Endothelial Cell
5
B Cell
5
Classical Dendritic Cell
5
Connecting Tubule Cell
5
Connecting Tubule Intercalated Cell Type A
5
Connecting Tubule Principal Cell
5
Cortical Thick Ascending Limb Cell
5
Cycling Endothelial Cell
5
Cycling Epithelial Cell
5
Cycling T Cell
5
Cytotoxic T Cell
5
Degenerative Connecting Tubule Cell
5
Degenerative Connecting Tubule Cell / Principal Cell
5
Degenerative Cortical Thick Ascending Limb Cell
5
Degenerative Distal Convoluted Tubule Cell
5
Degenerative Intercalated Cell Type A
5
Degenerative Peritubular Capillary Endothelial Cell
5
Degenerative Principal Cell
5
Degenerative Proximal Tubule Epithelial Cell
5
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
5
Degenerative Vascular Smooth Muscle Cell
5
Descending Thin Limb Cell Type 1
5
Distal Convoluted Tubule Cell Type 1
5
Fibroblast
5
Glomerular Capillary Endothelial Cell
5
Intercalated Cell Type A
5
Intercalated Cell Type B
5
Lymphatic Endothelial Cell
5
M2 Macrophage
5
Medullary Thick Ascending Limb Cell
5
Mesangial Cell
5
Monocyte
5
Monocyte-derived Cell
5
Myofibroblast
5
Natural Killer T Cell
5
Natural Killer T Cell Type 1
5
Natural Killer T Cell Type 2
5
Non-Classical Monocyte
5
Parietal Epithelial Cell
5
Peritubular Capillary Endothelial Cell
5
Plasma Cell
5
Plasmacytoid Dendritic Cell
5
Podocyte
5
Principal Cell
5
Proximal Tubule Epithelial Cell Segment 1 and 2
5
Proximal Tubule Epithelial Cell Segment 3
5
Regulatory T Cell
5
Renin-positive Juxtaglomerular Granular Cell
5
T Cell
5
Transitional Principal-Intercalated Cell
5
Vascular Smooth Muscle Cell / Pericyte
5
cholangiocyte
5
glomerular visceral epithelial cell
5
heart
5
kidney cortex collecting duct principal cell
5
leukocyte
5
mesangial cell
5
mesenchymal stem cell of adipose tissue
5
pancreatic D cell
5
pancreatic stellate cell
4
T-helper 2 cell
4
adipose tissue
4
articular chondrocyte
4
bone tissue
4
cardiac precursors (cardiac muscle cell)
4
cardiomyocytes (cardiac muscle cell)
4
endothelial cell of hepatic sinusoid
4
gamma-delta T cell
4
kidney distal convoluted tubule epithelial cell
4
mesothelial cell of epicardium
4
myeloid cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
4
nephron progenitor
4
pancreatic MUC5B+ductal cell
4
pancreatic alpha+beta cell
4
pancreatic cycling alpha cell
4
pancreatic endothelial cell
4
pancreatic gamma+epsilon cell
4
pancreatic macrophage cell
4
pancreatic mast cell
4
putamen
4
skeletal muscle satellite cell
3
CD8-positive, alpha-beta T cell
3
Cycling Mononuclear Phagocyte
3
Mast Cell
3
S-shaped body
3
T follicular helper cell
3
adult endothelial progenitor cell
3
astrocyte
3
blood cell
3
brain
3
caudate nucleus
3
central memory CD8-positive, alpha-beta T cell
3
cerebellum
3
coronary artery
3
effector memory CD8-positive, alpha-beta T cell
3
epithelial cell of distal tubule
3
fibro-adipogenic progenitor cell
3
frontal cortex
3
hepatocyte(AFP)
3
kidney cell
3
kidney collecting duct intercalated cell
3
kidney cortex collecting duct intercalated cell
3
kidney inner medulla collecting duct principal cell
3
kidney loop of Henle descending limb epithelial cell
3
kidney resident macrophage
3
liver
3
memory B cell
3
mesothelial cell
3
naive B cel
3
neuromuscular junction nucleus
3
omental fat pad
3
pancreatic quiescent stellate cell
3
renal principal cell
3
right atrium auricular region
3
skin of body
3
smooth muscle cell of the coronary artery
3
substantia nigra
3
tibial nerve
3
type 1 muscle cell
3
type 2a muscle cell
3
type 2x muscle cell
3
visceral abdominal adipose tissue
2
CD4-positive helper T cell
2
Kupffer cell
2
adipose-derived stem cell
2
adrenal gland
2
amygdala
2
anterior cingulate cortex
2
blood vessel
2
body of pancreas
2
differentiating adipose-derived stem cell
2
dorsolateral prefrontal cortex
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
embryonic stem cell
2
heart left ventricle
2
hypothalamus
2
iPSC derived cell line
2
kidney glomerular epithelial cell
2
kidney inner medulla collecting duct intercalated cell
2
lung
2
mature natural killer cell
2
memory T cell
2
memory regulatory T cell
2
minor salivary gland
2
muscle
2
naive thymus-derived CD4-positive, alpha-beta T cell
2
neural cell
Organ
1
intestine
1
small intestine
Date released
1
January, 2022
Software used
1
qTLtools
Lab
1
AMP-T2D consortium
Project
1
AMP
Collection Tags
1
T1D
1
T2D
1
eQTLCatalogue
RFA
1
AMP
assembly!
hg19
Showing 1 of 1 results
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Download
FileSet
DSR654RQI
released
Annotation file set
: small intestine eQTL of studay GTEx from eQTL Catalogue
Lab:
AMP-T2D consortium
Project:
AMP