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Assay category
1
3D chromatin structure
Assay
1
Hi-C
1
pCHi-C
Project
2
AMP
RFA
1
AMP
1
AMP2
Experiment status
2
released
Genome assembly (visualization)
hg19
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
tissue
Organ
1
adipose tissue
1
connective tissue
1
pancreas
Life stage
1
adult
1
unknown
Available data
394
bam
350
fastq
219
bed narrowPeak
199
tsv
160
tagAlign
157
txt
153
bigWig
153
zippedFastqFolder
79
bigBed narrowPeak
64
xls
24
bed bed3+
24
bed broadPeak
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
tbi
1
vcf
Platform
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
69
Library made from
2
DNA
Date released
1
August, 2018
1
August, 2021
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
1
anisogenic
1
unreplicated
assembly!
hg19
Showing 2 of 2 results
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Experiment
DSR942HZR
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (56 years) and female adult (59 years) and male adult (53 years)
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP