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Assay category
1
3D chromatin structure
Assay
1
Hi-C
1
pCHi-C
Project
2
AMP
RFA
1
AMP
1
AMP2
Experiment status
2
released
Genome assembly (visualization)
hg19
Organism
2
Homo sapiens
Biosample type
1
in vitro differentiated cells
1
tissue
Organ
1
adipose tissue
1
connective tissue
1
pancreas
Life stage
1
adult
1
unknown
Available data
394
bam
350
fastq
219
bed narrowPeak
198
tsv
160
tagAlign
157
txt
153
bigWig
153
zippedFastqFolder
79
bigBed narrowPeak
64
xls
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
Platform
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
69
Library made from
2
DNA
Date released
1
August, 2018
1
August, 2021
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
1
anisogenic
1
unreplicated
assembly!
hg19
Showing 2 of 2 results
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Experiment
DSR942HZR
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (56 years) and female adult (59 years) and male adult (53 years)
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP