Search – Common Metabolic Diseases Genome Atlas

Showing 25 of 92 results

FileSet
DSR485442
released
Annotation file set: The dataset contains differentially accessible cCREs between CAD and control in human visceral fat, derived from STARNET ATAC-seq data (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR352861
released
Annotation file set: The dataset contains differentially expressed genes between CAD and control in human visceral fat, derived from STARNET RNA-seq data (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR546806
released
Annotation file set: The dataset contains gene expression levels in human visceral fat, derived from STARNET RNA-seq data (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR611486
released
Annotation file set: The dataset contains cCRE–target gene links in human visceral fat, predicted from STARNET ATAC-seq data with detailed annotation (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR388902
released
Annotation file set: The dataset contains candidate cis-regulatory elements (cCREs) in human visceral fat, derived from STARNET ATAC-seq data (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR307DUL
released
Annotation file set: This file contains fine-mapping results for cis-eQTLs, identifying likely causal variants from STARNET bulk RNA-seq milestone 16 in visceral fat
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR697QDJ
released
Annotation file set: This file contains fine-mapping results for cis-eQTLs, identifying likely causal variants from STARNET bulk RNA-seq milestone 16 in subcutaneous adipose tissue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR089QMS
released
Annotation file set: This file includes eQTLs that regulate gene expression from distant locations from STARNET bulk RNA-seq milestone 16 in visceral fat
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR515IFG
released
Annotation file set: This file includes eQTLs that regulate gene expression from distant locations from STARNET bulk RNA-seq milestone 16 in subcutaneous adipose tissue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR265ZFE
released
Annotation file set: This file contains eQTLs that regulate nearby gene expression from STARNET bulk RNA-seq milestone 16 in visceral fat
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR460JSW
released
Annotation file set: This file contains eQTLs that regulate nearby gene expression from STARNET bulk RNA-seq milestone 16 in subcutaneous adipose tissue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR754CQX
released
Annotation file set: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for visceral fat (FDR=10%)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR895XAU
released
Annotation file set: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for subcutaneous adipose tissue (FDR=10%)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR252BTF
released
Annotation file set: Tissue-specific gene expression from STARNET bulk RNA seq data for visceral fat
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR225KLD
released
Annotation file set: Tissue-specific gene expression from STARNET bulk RNA seq data for subcutaneous adipose tissue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR614ZVC
released
Annotation file set: Accessible chromatin annotation of each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - adipocyte
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR020DGY
released
Annotation file set: Splicing Quantitative Trait Loci (sQTL) from human primary articular chondrocytes under fibronectin fragment (FN-f) performed using RNA-seq data from 101 samples.
Lab: Doug Phanstiel, UNC
Project: community
FileSet
DSR302PZQ
released
Annotation file set: Splicing Quantitative Trait Loci (sQTL) from human primary articular chondrocytes under hosphate buffer saline (PBS) resting performed using RNA-seq data from 101 samples.
Lab: Doug Phanstiel, UNC
Project: community
FileSet
DSR458YMM
released
Annotation file set: caQTL results in each cell type cluster identified from snRNA+snATAC profiling of human skeletal muscle - adipocyte
Lab: Stephen Parker, UMich
Project: AMP
FileSet
DSR602VGF
released
Annotation file set: eQTL of primary articular chondrocytes treated with fibronectin fragment (FN-f) from 101 donors
Lab: Doug Phanstiel, UNC
Project: community
FileSet
DSR932ZJL
released
Annotation file set: eQTL of primary articular chondrocytes treated with PBS from 101 donors
Lab: Doug Phanstiel, UNC
Project: community
FileSet
DSR483AIN
released
Annotation file set: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for visceral abdominal adipose tissue (FDR=10%)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR639EWK
released
Annotation file set: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for subcutaneous adipose tissue (FDR=10%)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR908GWN
released
Annotation file set: Differential activity annotation of Mesangial Cell between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab: KPMP
Project: KPMP
FileSet
DSR878WKF
released
Annotation file set: Differential activity annotation of Fibroblast between CKD and healthy individuals from KPMP scRNA-seq ( ~disease type + age + gender )
Lab: KPMP
Project: KPMP