Search – Common Metabolic Diseases Genome Atlas

Showing 25 of 42 results

FileSet
DSR241218
released
Annotation file set: The dataset contains differentially accessible cCREs between CAD and control in human liver, derived from STARNET ATAC-seq data (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR505915
released
Annotation file set: The dataset contains differentially expressed genes between CAD and control in human liver, derived from STARNET RNA-seq data (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR218017
released
Annotation file set: The dataset contains gene expression levels in human liver, derived from STARNET RNA-seq data (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR474569
released
Annotation file set: The dataset contains cCRE–target gene links in human liver, predicted from STARNET ATAC-seq data with detailed annotation (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR003603
released
Annotation file set: The dataset contains candidate cis-regulatory elements (cCREs) in human liver, derived from STARNET ATAC-seq data (milestone 17).
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR466QZJ
released
Annotation file set: This file contains fine-mapping results for cis-eQTLs, identifying likely causal variants from STARNET bulk RNA-seq milestone 16 in liver
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR307KJS
released
Annotation file set: This file includes eQTLs that regulate gene expression from distant locations from STARNET bulk RNA-seq milestone 16 in liver
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR671DTQ
released
Annotation file set: This file contains eQTLs that regulate nearby gene expression from STARNET bulk RNA-seq milestone 16 in liver
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR954EMJ
released
Annotation file set: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for liver (FDR=10%)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR651DUP
released
Annotation file set: Tissue-specific gene expression from STARNET bulk RNA seq data for liver
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR054IUR
released
Annotation file set: Tissue-specific differentially expressed genes for CAD case/control status from STARNET bulk RNA seq data for liver (FDR=10%)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR230XXF
released
Annotation file set: Differential activity within endothelial in T2D
Lab: Kyle Gaulton, UCSD
Project: AMP
FileSet
DSR481EVB
released
Annotation file set: Differential activity within endothelial in T1D
Lab: Kyle Gaulton, UCSD
Project: AMP
FileSet
DSR721CKF
released
Annotation file set: Differential activity within endothelial in T1D Aab+
Lab: Kyle Gaulton, UCSD
Project: AMP
FileSet
DSR000FZK
released
Annotation file set: Gene expression annotation of pancreatic endothelial from single-cell transcriptome analysis
Lab: Kyle Gaulton, UCSD
Project: AMP
FileSet
DSR336ZEK
released
Annotation file set: liver eQTL of studay GTEx from eQTL Catalogue
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR366OIY
released
Annotation file set: Binding sites of ChREBP, TF for liver lipogenesis, in HepG2 cells(PMID:21811631)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR606JYM
released
Annotation file set: eQTLS in different tissues: liver (960 samples)
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR129ATN
released
Annotation file set: Gene expression annotaion of liver cell in phase S from single cell transcriptome profiling of hESC-derived pancreatic progenitors
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR572UJX
released
Annotation file set: Gene expression annotaion of liver cell in phase G2M from single cell transcriptome profiling of hESC-derived pancreatic progenitors
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR437EKE
released
Annotation file set: Gene expression annotaion of liver cell in phase G1 from single cell transcriptome profiling of hESC-derived pancreatic progenitors
Lab: AMP-T2D consortium
Project: AMP
FileSet
DSR361ZHP
released
Annotation file set: Gene expression of primary hepatocytes in basal media with 10nM insulin, 320µM palmitic acid and 320µM oleic acid (18 hours). Monolayer culture, day 3.
Lab: Ines Cebola, Imperial College London
Project: AMP
FileSet
DSR693CSI
released
Annotation file set: Gene expression of primary hepatocytes in basal media with 10nM insulin and 320µM oleic acid (18 hours). Monolayer culture, day 3.
Lab: Ines Cebola, Imperial College London
Project: AMP
FileSet
DSR089LNQ
released
Annotation file set: Gene expression of primary hepatocytes in basal media with 10nM insulin and 320µM palmitic acid (18 hours). Monolayer culture, day 3.
Lab: Ines Cebola, Imperial College London
Project: AMP
FileSet
DSR597BJR
released
Annotation file set: Gene expression of primary hepatocytes in basal media with 10nM insulin (18 hours). Monolayer culture, day 3.
Lab: Ines Cebola, Imperial College London
Project: AMP