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Clear Filters
Annotation type
  • 4target gene predictions
  • 2sQTL
Annotation Category
  • 4Target gene links
  • 2Genetic variant effects
Annotation type Category
  • 4DNase-seq
  • 2RNA-seq
Available data
  • 4bed bed3+
  • 2csv
File set status
  • 6released
Genome assembly (visualization)
  • hg19
  • 15GRCh38
Organism
  • 6Homo sapiens
Biosample type
  • 5primary cell
  • 1tissue
Biosample term
  • 2articular chondrocyte
  • 1amniotic epithelial cell
  • 1amniotic stem cell
  • 1dedifferentiated amniotic fluid mesenchymal stem cell
  • 1femur
Organ
  • 3159blood
  • 2702blood vessel
  • 2698vasculature
  • 2638vein
  • 2636bodily fluid
  • 480brain
  • 369kidney
  • 352epithelium
  • 233heart
  • 133pancreas
  • 131connective tissue
  • 131lung
  • 111muscle organ
  • 104liver
  • 97skin of body
  • 75intestine
  • 73adipose tissue
  • 60__MARKER__
  • 56large intestine
  • 54eye
  • 44thymus
  • 31adrenal gland
  • 31spleen
  • 29extraembryonic component
  • 28artery
  • 26thyroid gland
  • 25placenta
  • 24stomach
  • 21bone element
  • 19gonad
  • 19musculature of body
  • 17mammary gland
  • 14small intestine
  • 13uterus
  • 11ovary
  • 11prostate gland
  • 10embryo
  • 9ureter
  • 8esophagus
  • 8spinal cord
  • 8testis
  • 7limb
  • 6skeleton
  • 5lymphatic vessel
  • 4breast
  • 4mouth
  • 4urinary bladder
  • 4vagina
  • 3nerve
  • 3tongue
  • 2pituitary gland
  • 1embryonic structure
  • 1gallbladder
  • 1lymphoid tissue
  • 1pericardium
Life stage
  • 2adult
Date released
  • 4July, 2026
  • 2January, 2025
Software used
  • 2qTLtools
Lab
  • 4AMP-T2D consortium
  • 2Doug Phanstiel, UNC
Project
  • 4AMP
  • 2community
Collection Tags
  • 4ENCODE-rE2G
RFA
  • 4AMP
  • 2community
assembly!
  • hg19

Showing 6 of 6 results

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  • FileSet

    DSR442748

    released

    Annotation file set: Target gene predictions for femur (UBERON:0000981) derived from ENCODE-rE2G (ENCSR819LTS).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR729187

    released

    Annotation file set: Target gene predictions for dedifferentiated amniotic fluid mesenchymal stem cell (NTR:0005063) derived from ENCODE-rE2G (ENCSR154KHF).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR472020

    released

    Annotation file set: Target gene predictions for amniotic stem cell (CL:0002639) derived from ENCODE-rE2G (ENCSR204AGU).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR625887

    released

    Annotation file set: Target gene predictions for amniotic epithelial cell (CL:0002536) derived from ENCODE-rE2G (ENCSR935SVA).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR020DGY

    released

    Annotation file set: Splicing Quantitative Trait Loci (sQTL) from human primary articular chondrocytes under fibronectin fragment (FN-f) performed using RNA-seq data from 101 samples.
    Lab: Doug Phanstiel, UNC
    Project: community
  • FileSet

    DSR302PZQ

    released

    Annotation file set: Splicing Quantitative Trait Loci (sQTL) from human primary articular chondrocytes under hosphate buffer saline (PBS) resting performed using RNA-seq data from 101 samples.
    Lab: Doug Phanstiel, UNC
    Project: community
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