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Schema
Citing CMDGA
Clear Filters
Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
Capture-C
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
hg19
0
GRCh38
Organism
1
Homo sapiens
Biosample type
1
stem cell
Biosample term
115
monocyte
87
heart
85
stomach
74
kidney
72
brain
67
lung
67
muscle of arm
64
HeLa-S3
63
small intestine
62
A549
61
adrenal gland
60
placenta
58
muscle of leg
56
large intestine
54
common myeloid progenitor, CD34-positive
54
muscle of back
52
left lung
CD8-positive, alpha-beta T cell
48
thymus
46
H1-hESC
46
liver
45
B cell
45
right lung
43
neural progenitor cell
42
hematopoietic multipotent progenitor cell
41
K562
41
right kidney
40
renal cortex interstitium
40
renal pelvis
39
retina
36
left kidney
35
endothelial cell
35
fibroblast
35
spinal cord
33
heart left ventricle
33
macrophage
33
spleen
32
CD4-positive, alpha-beta memory T cell
31
CD14-positive monocyte
30
hepatocyte
29
adipose tissue
28
adipocyte
28
islet of Langerhans
26
MCF-7
26
smooth muscle cell
24
natural killer cell
24
pericyte cell
23
sigmoid colon
23
tibial nerve
23
trophoblast cell
22
CD8-positive, alpha-beta memory T cell
22
T cell
22
body of pancreas
22
foreskin keratinocyte
22
pancreas
21
keratinocyte
21
regulatory T cell
20
breast cancer cell
20
caudate nucleus
20
mononuclear cell
20
pigmented layer of retina
20
psoas muscle
19
coronary artery
19
foreskin fibroblast
19
mesenchymal stem cell
19
ovary
18
HFFc6
18
endothelial cell of umbilical vein
18
gastrocnemius medialis
18
heart right ventricle
18
thyroid gland
18
transverse colon
17
cardiac muscle cell
17
muscle of trunk
17
right atrium auricular region
17
tibial artery
16
GM12878
16
chorionic villus
16
embryonic stem cell
16
endothelial cell of hepatic sinusoid
16
fibroblast of cardiac tissue
16
fibroblast of lung
16
layer of hippocampus
16
retinal pigment epithelial cell
16
substantia nigra
16
testis
16
upper lobe of left lung
15
CD4-positive, alpha-beta T cell
15
HepG2
15
T-helper 1 cell
15
astrocyte
15
mammary gland epithelial cell
15
neutrophil
15
pancreatic ductal cell
15
skeletal muscle tissue
14
H9
14
T-helper 17 cell
14
T-helper 2 cell
14
ascending aorta
14
endocrine pancreas
14
omental fat pad
14
osteoblast
14
prostate gland
14
skeletal muscle myoblast
14
subcutaneous adipose tissue
13
Peyer's patch
13
bronchial epithelial cell
13
cerebellum
13
neurosphere
13
putamen
12
EndoC_BH1
12
aorta
12
excitatory neuron
12
fibroblast of dermis
12
frontal cortex
12
lymphoblastoid cell line
12
mammary epithelial cell
12
neuroblastoma cell
12
neuronal stem cell
12
pancreatic beta cell
12
skeletal muscle satellite cell
11
Ammon's horn
11
breast epithelium
11
epithelial cell of prostate
11
erythroblast
11
left renal cortex interstitium
11
left renal pelvis
11
naive thymus-derived CD4-positive, alpha-beta T cell
11
pancreatic acinar cell
11
right renal pelvis
11
temporal lobe
10
22Rv1
10
Rhabdomyosarcoma
10
choroid plexus epithelial cell
10
esophagus muscularis mucosa
10
esophagus squamous epithelium
10
gastric cancer cell
10
left cardiac atrium
10
lymphocyte
10
pancreatic alpha cell
10
skin fibroblast
10
thoracic aorta
10
trophoblast
9
SK-N-DZ
9
SK-N-SH
9
colonic mucosa
9
diffuse intrinsic pontine glioma
9
esophagus
9
hepatic stellate cell
9
kidney tubule cell
9
liposarcoma
9
pancreatic delta cell
9
parathyroid adenoma
9
right renal cortex interstitium
9
tongue
8
B-lymphoblastoid cell line
8
GM12865
8
HEK293
8
IMR-90
8
NAMALWA cell
8
cingulate gyrus
8
colon epithelial cell
8
dermis blood vessel endothelial cell
8
duodenal mucosa
8
endodermal cell
8
fibroblast cell line
8
immortal human breast epithelial cell line cell
8
limb
8
lower leg skin
8
mesendoderm
8
myoepithelial cell of mammary gland
8
naive T cell
8
pituitary stalk
8
skeletal muscle fiber
8
vagina
7
AG04449 cell
7
AG04450 cell
7
AG09309 cell
7
AG09319 cell
7
AG10803 cell
7
BE(2)-C
7
BJ cell
7
CD1c-positive myeloid dendritic cell
7
CD4-positive helper T cell
7
CMK
7
Caco-2 cell
7
GM06990
7
GM12864
7
HT-29
7
SK-N-MC
7
T47D
7
WERI-Rb-1
7
angular gyrus
7
chorion membrane
7
dermis lymphatic vessel endothelial cell
7
endometrium adenocarcinoma
7
esophageal adenocarcinoma
7
eye
7
fibroblast of pulmonary artery
7
foreskin melanocyte
Organ
1
brain
Date released
1
September, 2023
Software used
1
chicago
Lab
1
Struan F.A. Grant, CHOP
Project
1
AMP
RFA
1
AMP2
biosample_term_name!
CD8-positive, alpha-beta T cell
Showing 1 of 1 results
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Download
FileSet
DSR843RXV
released
Annotation file set
: Target gene annotation of open chromatin regions from promoter capture c of ESC (1frag and 4 frag)
Lab:
Struan F.A. Grant, CHOP
Project:
AMP