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Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
1
chromatin state
Annotation Category
4
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
ATAC-seq
1
ChIP-seq
Available data
3
bed bed3+
3
bigWig
1
bed bed9
File set status
4
released
Genome assembly (visualization)
14
hg19
4
GRCh38
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Biosample term
8
body of pancreas
8
islet of Langerhans
6
pancreas
6
pancreatic acinar cell
6
pancreatic ductal cell
4
endocrine pancreas
4
pancreatic beta cell
3
pancreatic A cell
3
pancreatic alpha cell
3
type B pancreatic cell
2
pancreatic delta cell
2
pancreatic stellate cell
1
8988T
1
EndoC_BH1
1
HPDE6-E6E7
1
Panc1
1
pancreatic D cell
1
pancreatic PP cell
Disease term
1
pancreatic adenocarcinoma
Organ
4
pancreas
3
epithelium
Life stage
2
adult
Date released
2
November, 2021
1
October, 2019
1
September, 2022
Software used
3
macs
1
chromhmm
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
2
AMP
2
ENCODE
RFA
2
AMP
2
ENCODE3
organ_slims!
vagina
Showing 4 of 4 results
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Download
FileSet
DSR573XEL
released
Annotation file set
: Chromatin states for BSS00003 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR853JCR
released
Annotation file set
: Accessible chromatin annotation of Pancreatic Alpha Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR959HLG
released
Annotation file set
: Accessible chromatin annotation of Pancreatic Alpha Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR110ITH
released
Annotation file set
: Pancreatic alpha cell accessible chromatin annotation of overlapping ATAC-seq sites from 5 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP