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Schema
Citing CMDGA
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Annotation type
1
accessible chromatin
1
target gene predictions
Annotation Category
1
Target gene links
1
cis-regulatory elements
Annotation type Category
1
ATAC-seq
1
snATAC-seq
Available data
2
bed bed3+
1
bigWig
File set status
2
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
18
fibroblast
18
pericyte cell
12
excitatory neuron
12
smooth muscle cell
10
macrophage
9
astrocyte
5
erythroblast
5
inhibitory neuron
4
T cell
4
blood vessel smooth muscle cell
4
enteric smooth muscle cell
4
gabaergic neuron
4
glutamatergic neuron
4
skeletal muscle satellite cell
4
smooth muscle cell of the esophagus
3
B cell
3
enteric neuron
3
fibroblast of cardiac tissue
3
oligodendrocyte precursor cell
3
schwann cell
3
skeletal muscle fiber
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta T cell
2
Muller cell
2
alveolar macrophage
2
basal cell
2
ciliated cell
2
colon goblet cell
2
fetal cardiomyocyte
2
intestinal tuft cell
2
luteal cell
2
mast cell
2
mature NK T cell
2
melanocyte
2
memory B cell
2
mesangial cell
2
microglial cell
2
naive t cell
2
oligodendrocyte
2
plasma cell
2
regular atrial cardiac myocyte
2
skeletal muscle fibroblast
2
skin fibroblast
2
stromal cell
2
type I muscle cell
2
type II muscle cell
2
uterine smooth muscle cell
2
ventricular cardiac muscle cell
1
adipocyte
1
extravillous trophoblast
1
fat cell
1
fetal thymocyte
1
glial cell
1
hepatic stellate cell
1
hepatoblast
1
islet of Langerhans
1
megakaryocyte
1
metanephros
1
neuron
1
peripheral neuron
1
photoreceptor cell
1
retinal bipolar neuron
1
sympathetic neuron
Date released
2
November, 2021
Software used
1
abc
1
macs
Lab
2
Bing Ren, UCSD
Project
2
ENCODE
RFA
2
ENCODE3
organ_slims!
epithelium
extraembryonic component
Showing 2 of 2 results
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Download
FileSet
DSR786GAR
released
Annotation file set
: Target gene predictions of T Lymphocyte 1 (CD8+) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR552LZW
released
Annotation file set
: Accessible chromatin annotation of T Lymphocyte 1 (CD8+) from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE