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Citing CMDGA
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Annotation type
1
target gene predictions
Annotation Category
1
Target gene links
Annotation type Category
1
HiC
Available data
1
bed bed3+
File set status
1
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
100
monocyte
51
HeLa-S3
37
H1-hESC
25
fibroblast
23
neural progenitor cell
22
endothelial cell
22
macrophage
20
pericyte cell
19
HFFc6
17
hepatocyte
16
K562
16
endothelial cell of hepatic sinusoid
15
smooth muscle cell
13
excitatory neuron
11
kidney
10
astrocyte
10
coronary artery
8
tibial artery
8
tibial nerve
7
T cell
7
heart left ventricle
7
islet of Langerhans
7
putamen
7
right atrium auricular region
7
subcutaneous adipose tissue
6
B cell
6
GM12878
6
H9
6
ascending aorta
6
caudate nucleus
6
cerebellum
6
colon epithelial cell
6
endothelial cell of lymphatic vessel
6
frontal cortex
6
iPSC derived cell line
6
left cardiac atrium
6
lymphoblastoid cell line
6
lymphocyte
6
olfactory receptor cell
6
omental fat pad
6
pancreatic acinar cell
6
pancreatic ductal cell
6
substantia nigra
5
Ammon's horn
5
amygdala
5
anterior cingulate cortex
5
brain
5
cortical cell of adrenal gland
5
endocardial cell
5
erythroblast
5
heart
5
hypothalamus
5
inhibitory neuron
5
mast cell
5
nucleus accumbens
5
skeletal muscle satellite cell
5
type II pneumocyte
4
C1 segment of cervical spinal cord
4
CyT49
4
HUES8
4
blood vessel smooth muscle cell
4
body of pancreas
4
cerebellum (Hemisphere)
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
enteric smooth muscle cell
4
gabaergic neuron
4
gastrocnemius medialis(Muscle - Skeletal)
4
glutamatergic neuron
4
keratinocyte
4
left ventricle myocardium
4
luminal epithelial cell of mammary gland
4
natural killer cell
4
pancreas
4
pancreatic beta cell
4
right lobe of liver
4
smooth muscle cell of the esophagus
3
cardiac fibroblast
3
CD4-positive helper T cell
3
adipocyte
3
blood cell
3
endothelial cell of umbilical vein
3
enteric neuron
3
enterocyte
3
fibroblast of cardiac tissue
3
heart right ventricle
3
hepatic stellate cell
3
liver
3
mesothelial cell
3
microglial cell
3
muscle of leg
3
oligodendrocyte precursor cell
3
osteoblast
3
pancreatic A cell
3
pancreatic alpha cell
3
schwann cell
3
skeletal muscle fiber
3
skin of body
3
type B pancreatic cell
3
type I pneumocyte
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta T cell
2
HCT116
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
alveolar macrophage
2
angular gyrus
2
aorta
2
basal cell
2
basal cell of epidermis
2
cardiac endothelial cell
2
cardiac muscle cell
2
cholangiocyte
2
ciliated cell
2
club cell
2
colon goblet cell
2
eccrine cell
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
fat cell
2
fetal cardiomyocyte
2
foveolar cell of stomach
2
granular cell of epidermis
2
intestinal tuft cell
2
luteal cell
2
mammary gland epithelial cell
2
mature NK T cell
2
melanocyte
2
memory B cell
2
mesangial cell
2
muscle
2
myoepithelial cell
2
naive t cell
2
neuronal stem cell
2
non keratinizing barrier epithelial cell
2
oligodendrocyte
2
pancreatic delta cell
2
pancreatic stellate cell
2
paneth cell
2
parietal cell
2
peptic cell
2
plasma cell
2
regular atrial cardiac myocyte
2
regular ventricular cardiac myocyte
2
regulatory T cell
2
respiratory goblet cell
2
retina
2
retinal pigment epithelial cell
2
right cardiac atrium
2
skeletal muscle fibroblast
2
skin fibroblast
2
small intestine goblet cell
2
smooth muscle cell of the coronary artery
2
spleen
2
stomach neuroendocrine cell
2
stromal cell
2
temporal lobe
2
thoracic aorta
2
thyroid follicular cell
2
type I cell of adrenal cortex
2
type I muscle cell
2
type II cell of adrenal cortex
2
type II muscle cell
2
uterine smooth muscle cell
2
ventricular cardiac muscle cell
1
hindlimb muscle
1
EndoC_BH1
1
GM18486
1
GM18505
1
GM18507
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
1
GM19238
1
GM19239
1
GM19240
1
HepG2
1
Leydig cell
1
Schwann cell
1
T follicular helper cell
1
T-helper 1 cell
1
T-helper 17 cell
1
T-helper 2 cell
1
abdominal aorta artery
1
activated CD4-positive, alpha-beta T cell
1
activated CD8-positive, alpha-beta T cell
1
adipose tissue
1
adrenal gland
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
brain microvascular endothelial cell
1
brain pericyte
1
breast
1
cardiac precursors
1
cerebellar cortex
1
cerebellar hemisphere
1
choroid plexus epithelial cell
Date released
1
February, 2024
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
month_released!
September, 2022
Showing 1 of 1 results
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Download
FileSet
DSR242EAO
released
Annotation file set
: Target gene predictions from Hi-C on lympoblastoid cell lines from 1000G individuals. GM19204
Lab:
AMP-T2D consortium
Project:
AMP