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Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
1
chromatin state
Annotation Category
1
cis-regulatory elements
Annotation type Category
1
ChIP-seq
Available data
1
bed bed9
File set status
1
released
Genome assembly (visualization)
24
hg19
1
GRCh38
Organism
1
Homo sapiens
Biosample type
1
cell line
Biosample term
54
HeLa-S3
38
H1-hESC
27
neural progenitor cell
25
kidney
24
heart
22
K562
21
brain
20
stomach
19
HFFc6
18
A549
17
lung
17
muscle of arm
16
muscle of leg
16
small intestine
15
adrenal gland
15
placenta
13
large intestine
13
left lung
13
muscle of back
12
coronary artery
12
heart left ventricle
11
right kidney
11
right lung
11
thymus
11
tibial nerve
10
hematopoietic multipotent progenitor cell
10
liver
10
renal cortex interstitium
10
renal pelvis
10
tibial artery
9
caudate nucleus
9
left kidney
9
right atrium auricular region
8
ascending aorta
8
body of pancreas
8
cerebellum
8
frontal cortex
8
omental fat pad
8
putamen
8
spinal cord
8
spleen
8
substantia nigra
7
GM12878
7
H9
7
adipose tissue
7
islet of Langerhans
7
left cardiac atrium
7
lymphocyte
7
subcutaneous adipose tissue
6
Ammon's horn
6
HepG2
6
heart right ventricle
6
iPSC derived cell line
6
lymphoblastoid cell line
6
pancreas
5
MCF-7
5
amygdala
5
anterior cingulate cortex
5
hypothalamus
5
nucleus accumbens
5
ovary
5
retina
5
right lobe of liver
5
sigmoid colon
5
thyroid gland
5
transverse colon
4
C1 segment of cervical spinal cord
4
CyT49
4
HUES8
4
angular gyrus
4
aorta
4
cerebellum (Hemisphere)
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
gastrocnemius medialis
4
gastrocnemius medialis(Muscle - Skeletal)
4
layer of hippocampus
4
left ventricle myocardium
4
muscle of trunk
4
psoas muscle
4
skin of body
4
temporal lobe
4
testis
4
thoracic aorta
3
HCT116
3
Peyer's patch
3
chorion membrane
3
endometrium adenocarcinoma
3
esophagus
3
esophagus muscularis mucosa
3
immortal human breast epithelial cell line cell
3
left renal cortex interstitium
3
left renal pelvis
3
prostate gland
3
right cardiac atrium
3
right renal cortex interstitium
3
right renal pelvis
3
skeletal muscle tissue
3
upper lobe of left lung
3
vagina
2
22Rv1
2
Brodmann (1909) area 46
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
LNCaP clone FGC
2
NAMALWA cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
adipocyte
2
breast epithelium
2
cardiac muscle cell
2
cerebellar cortex
2
cingulate gyrus
2
colonic mucosa
2
duodenal mucosa
2
endodermal cell
2
esophagus squamous epithelium
2
eye
2
germinal matrix
2
globus pallidus
2
limb
2
lower leg skin
2
medulla oblongata
2
mesenchymal stem cell
2
midbrain
2
middle frontal gyrus
2
mucosa of rectum
2
muscle
2
muscle cell
2
muscle layer of colon
2
muscle layer of duodenum
2
occipital lobe
2
pancreatic ductal cell
2
pancreatic stellate cell
2
parathyroid adenoma
2
pons
2
stomach smooth muscle
2
superior temporal gyrus
2
tongue
2
trophoblast
2
urinary bladder
2
uterus
1
hindlimb muscle
1
8988T
1
A172
1
A673
1
ACC112
1
ACHN
1
AG04449 cell
1
AG04450 cell
1
AG08395 cell
1
AG08396 cell
1
AG09309 cell
1
AG09319 cell
1
AG10803 cell
1
AG20443
1
BE(2)-C
1
BJ cell
1
C4-2B
1
CMK
1
COLO829
1
CWRU1
1
Caco-2 cell
1
Caki2
1
DND-41
1
DOHH2
1
Daoy
1
EH
1
EL
1
ELF-1
1
ELR
1
ES-I3
1
EndoC_BH1
1
G401
1
GM03348
1
GM04503
1
GM04504
1
GM06990
1
GM08714
1
GM10248
1
GM10266
1
GM12864
1
GM12865
1
GM12875
1
GM12891
1
GM12892
1
GM18486
1
GM18505
1
GM18508
1
GM18516
1
GM18522
1
GM19099
1
GM19141
1
GM19193
1
GM19204
Disease term
1
colorectal adenocarcinoma
Organ
1
intestine
1
large intestine
Life stage
1
adult
Date released
1
September, 2022
Software used
1
chromhmm
Lab
1
AMP-T2D consortium
Project
1
AMP
RFA
1
AMP
biosample_term_name!
LNCAP
biosample_type!
primary cell
Showing 1 of 1 results
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Download
FileSet
DSR895ABN
released
Annotation file set
: Chromatin states for BSS00708 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP