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Citing CMDGA
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Annotation type
5
chromatin state
Annotation Category
5
cis-regulatory elements
Annotation type Category
5
ChIP-seq
Available data
5
bed bed9
File set status
5
released
Genome assembly (visualization)
26
hg19
5
GRCh38
Organism
5
Homo sapiens
Biosample type
5
cell line
Biosample term
100
monocyte
54
HeLa-S3
38
H1-hESC
27
neural progenitor cell
25
fibroblast
25
kidney
24
heart
22
K562
22
endothelial cell
22
macrophage
21
pericyte cell
20
stomach
19
HFFc6
19
hepatocyte
18
A549
17
lung
17
muscle of arm
16
endothelial cell of hepatic sinusoid
16
muscle of leg
16
small intestine
16
smooth muscle cell
15
adrenal gland
15
placenta
14
B cell
13
common myeloid progenitor, CD34-positive
13
excitatory neuron
13
large intestine
13
left lung
13
muscle of back
12
coronary artery
12
heart left ventricle
11
T cell
11
astrocyte
11
right kidney
11
right lung
11
thymus
11
tibial nerve
10
hematopoietic multipotent progenitor cell
10
liver
10
renal cortex interstitium
10
renal pelvis
10
tibial artery
9
CD4-positive, alpha-beta memory T cell
9
left kidney
9
right atrium auricular region
8
ascending aorta
8
body of pancreas
8
islet of Langerhans
8
omental fat pad
8
spinal cord
8
spleen
7
CD8-positive, alpha-beta memory T cell
7
GM12878
7
H9
7
adipose tissue
7
colon epithelial cell
7
left cardiac atrium
7
lymphocyte
7
natural killer cell
7
subcutaneous adipose tissue
6
HepG2
6
endothelial cell of lymphatic vessel
6
fibroblast of cardiac tissue
6
heart right ventricle
6
iPSC derived cell line
6
keratinocyte
6
lymphoblastoid cell line
6
mononuclear cell
6
olfactory receptor cell
6
pancreas
6
pancreatic acinar cell
6
pancreatic ductal cell
6
skeletal muscle satellite cell
5
MCF-7
5
adipocyte
5
cortical cell of adrenal gland
5
endocardial cell
5
endothelial cell of umbilical vein
5
erythroblast
5
inhibitory neuron
5
luminal epithelial cell of mammary gland
5
mammary gland epithelial cell
5
mast cell
5
ovary
5
regulatory T cell
5
retina
5
right lobe of liver
5
sigmoid colon
5
thyroid gland
5
transverse colon
5
trophoblast cell
5
type II pneumocyte
4
C1 segment of cervical spinal cord
4
CD14-positive monocyte
4
CyT49
4
HUES8
4
T-helper 1 cell
4
T-helper 17 cell
4
T-helper 2 cell
4
aorta
4
blood vessel smooth muscle cell
4
chorionic villus
4
endocrine pancreas
4
enteric smooth muscle cell
4
foreskin keratinocyte
4
gabaergic neuron
4
gastrocnemius medialis
4
gastrocnemius medialis(Muscle - Skeletal)
4
glutamatergic neuron
4
hepatic stellate cell
4
left ventricle myocardium
4
muscle of trunk
4
osteoblast
4
pancreatic beta cell
4
psoas muscle
4
skin fibroblast
4
skin of body
4
smooth muscle cell of the esophagus
4
testis
4
thoracic aorta
3
CD4-positive helper T cell
3
HCT116
3
Peyer's patch
3
blood cell
3
cardiac muscle cell
chorion membrane
3
endometrium adenocarcinoma
3
enteric neuron
3
enterocyte
3
esophagus
3
esophagus muscularis mucosa
3
fibroblast of dermis
3
fibroblast of lung
3
immortal human breast epithelial cell line cell
3
kidney tubule cell
3
left renal cortex interstitium
3
left renal pelvis
3
mesenchymal stem cell
3
mesothelial cell
3
microglial cell
3
naive T cell
3
neurosphere
3
neutrophil
3
oligodendrocyte precursor cell
3
pancreatic A cell
3
pancreatic alpha cell
3
prostate gland
3
retinal pigment epithelial cell
3
right cardiac atrium
3
right renal cortex interstitium
3
right renal pelvis
3
schwann cell
3
skeletal muscle fiber
3
skeletal muscle tissue
3
type B pancreatic cell
3
type I pneumocyte
3
upper lobe of left lung
3
vagina
2
22Rv1
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta T cell
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
LNCaP clone FGC
2
Muller cell
2
NAMALWA cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
T47D
2
alveolar macrophage
2
basal cell
2
basal cell of epidermis
2
breast epithelium
2
bronchial epithelial cell
2
cardiac endothelial cell
2
cholangiocyte
2
ciliated cell
2
club cell
2
colon goblet cell
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
eccrine cell
2
endodermal cell
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
epithelial cell of prostate
2
epithelial cell of proximal tubule
2
esophagus squamous epithelium
2
eye
2
fat cell
2
fetal cardiomyocyte
2
fibroblast of breast
2
fibroblast of the aortic adventitia
2
foreskin fibroblast
2
foveolar cell of stomach
2
germinal matrix
2
glomerular endothelial cell
Disease term
5
breast cancer
Organ
5
mammary gland
Life stage
5
adult
Date released
5
September, 2022
Software used
5
chromhmm
Lab
5
AMP-T2D consortium
Project
5
AMP
RFA
5
AMP
biosample_term_name!
chorion membrane
organ_slims!
brain
Showing 5 of 5 results
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Download
FileSet
DSR097QMG
released
Annotation file set
: Chromatin states for BSS01244 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR983KRN
released
Annotation file set
: Chromatin states for BSS01243 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR213OTC
released
Annotation file set
: Chromatin states for BSS01240 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR128LSP
released
Annotation file set
: Chromatin states for BSS01235 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR624TOZ
released
Annotation file set
: Chromatin states for BSS01226 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP