Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
chromatin state
Annotation Category
3
cis-regulatory elements
Annotation type Category
3
ChIP-seq
Available data
3
bed bed9
File set status
3
released
Genome assembly (visualization)
16
hg19
3
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
100
monocyte
27
neural progenitor cell
25
fibroblast
25
kidney
24
heart
22
endothelial cell
22
macrophage
21
brain
21
pericyte cell
20
stomach
19
hepatocyte
17
lung
17
muscle of arm
16
endothelial cell of hepatic sinusoid
16
muscle of leg
16
small intestine
16
smooth muscle cell
15
adrenal gland
15
placenta
14
B cell
13
common myeloid progenitor, CD34-positive
13
excitatory neuron
13
large intestine
13
left lung
13
muscle of back
12
coronary artery
12
heart left ventricle
11
T cell
11
astrocyte
11
right kidney
11
right lung
11
thymus
11
tibial nerve
10
hematopoietic multipotent progenitor cell
10
liver
10
renal cortex interstitium
10
renal pelvis
10
tibial artery
9
CD4-positive, alpha-beta memory T cell
9
caudate nucleus
9
left kidney
9
right atrium auricular region
8
ascending aorta
8
body of pancreas
8
cerebellum
8
frontal cortex
8
islet of Langerhans
8
omental fat pad
8
putamen
8
spinal cord
8
spleen
8
substantia nigra
7
CD8-positive, alpha-beta memory T cell
7
adipose tissue
7
left cardiac atrium
7
natural killer cell
7
subcutaneous adipose tissue
6
Ammon's horn
6
colon epithelial cell
6
endothelial cell of lymphatic vessel
6
fibroblast of cardiac tissue
6
heart right ventricle
6
keratinocyte
6
mononuclear cell
6
olfactory receptor cell
6
pancreas
6
pancreatic acinar cell
6
pancreatic ductal cell
6
skeletal muscle satellite cell
5
adipocyte
5
amygdala
5
anterior cingulate cortex
5
cortical cell of adrenal gland
5
endocardial cell
5
endothelial cell of umbilical vein
5
erythroblast
5
hypothalamus
5
inhibitory neuron
5
luminal epithelial cell of mammary gland
5
mammary gland epithelial cell
5
mast cell
5
nucleus accumbens
5
ovary
5
regulatory T cell
5
retina
5
right lobe of liver
5
sigmoid colon
5
thyroid gland
5
transverse colon
5
trophoblast cell
5
type II pneumocyte
4
C1 segment of cervical spinal cord
4
CD14-positive monocyte
4
T-helper 1 cell
4
T-helper 17 cell
4
T-helper 2 cell
4
angular gyrus
4
aorta
4
blood vessel smooth muscle cell
4
cerebellum (Hemisphere)
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
enteric smooth muscle cell
4
foreskin keratinocyte
4
gabaergic neuron
4
gastrocnemius medialis
4
gastrocnemius medialis(Muscle - Skeletal)
4
glutamatergic neuron
4
hepatic stellate cell
4
layer of hippocampus
4
left ventricle myocardium
4
muscle of trunk
4
osteoblast
4
pancreatic beta cell
4
psoas muscle
4
skin fibroblast
4
skin of body
4
smooth muscle cell of the esophagus
4
temporal lobe
4
testis
4
thoracic aorta
3
cardiac fibroblast
3
CD4-positive helper T cell
3
Peyer's patch
3
blood cell
3
cardiac muscle cell
3
chorion membrane
3
enteric neuron
3
enterocyte
3
esophagus
3
esophagus muscularis mucosa
3
fibroblast of dermis
3
fibroblast of lung
3
kidney tubule cell
3
left renal cortex interstitium
3
left renal pelvis
3
mesenchymal stem cell
3
mesothelial cell
3
microglial cell
3
naive T cell
3
neurosphere
3
neutrophil
3
oligodendrocyte precursor cell
3
pancreatic A cell
3
pancreatic alpha cell
3
prostate gland
3
retinal pigment epithelial cell
3
right cardiac atrium
3
right renal cortex interstitium
3
right renal pelvis
3
schwann cell
3
skeletal muscle fiber
3
skeletal muscle tissue
3
type B pancreatic cell
3
type I pneumocyte
3
upper lobe of left lung
3
vagina
2
Brodmann (1909) area 46
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta T cell
2
Muller cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
alveolar macrophage
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
basal cell
2
basal cell of epidermis
2
brain microvascular endothelial cell
2
breast epithelium
2
bronchial epithelial cell
2
cardiac endothelial cell
2
cerebellar cortex
2
cholangiocyte
2
choroid plexus epithelial cell
2
ciliated cell
2
cingulate gyrus
2
club cell
2
colon goblet cell
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
eccrine cell
2
endodermal cell
2
enterochromaffin-like cell
2
enterocyte of epithelium of small intestine
2
epithelial cell of prostate
2
epithelial cell of proximal tubule
2
esophagus squamous epithelium
2
eye
2
fat cell
2
fetal cardiomyocyte
2
fibroblast of breast
2
fibroblast of the aortic adventitia
2
foveolar cell of stomach
2
germinal matrix
2
globus pallidus
2
glomerular endothelial cell
2
granular cell of epidermis
Organ
3
connective tissue
3
lung
Life stage
2
unknown
1
adult
Date released
3
September, 2022
Software used
3
chromhmm
Lab
3
AMP-T2D consortium
Project
3
AMP
RFA
3
AMP
biosample_type!
cell line
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR805FGA
released
Annotation file set
: Chromatin states for BSS00342 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR223DHC
released
Annotation file set
: Chromatin states for BSS00341 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR910XOT
released
Annotation file set
: Chromatin states for BSS00339 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP