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Schema
Citing CMDGA
Clear Filters
Annotation type
1
accessible chromatin
1
chromatin state
Annotation Category
2
cis-regulatory elements
Annotation type Category
1
ChIP-seq
1
DNase-seq
Available data
1
bed bed3+
1
bed bed9
1
bigWig
File set status
2
released
Genome assembly (visualization)
7
hg19
2
GRCh38
Organism
2
Homo sapiens
Biosample type
2
primary cell
Biosample term
25
kidney
11
right kidney
10
renal cortex interstitium
10
renal pelvis
9
left kidney
3
kidney tubule cell
3
left renal cortex interstitium
3
left renal pelvis
3
right renal cortex interstitium
3
right renal pelvis
2
epithelial cell of proximal tubule
2
glomerular endothelial cell
2
glomerular visceral epithelial cell
2
kidney capillary endothelial cell
2
kidney epithelial cell
2
kidney glomerular epithelial cell
2
renal cortical epithelial cell
1
ACHN
1
Caki2
1
G401
1
HEK293
1
HEK293T
1
RCC 7860
1
cortex of kidney
1
metanephros
1
parietal epithelial cell
1
renal cell carcinoma
1
ureteric bud
Organ
2
epithelium
2
kidney
Life stage
1
unknown
Date released
1
January, 2020
1
September, 2022
Software used
1
chromhmm
1
macs
Lab
2
AMP-T2D consortium
Project
2
AMP
RFA
2
AMP
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FileSet
DSR129CVZ
released
Annotation file set
: Chromatin states for BSS00310 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR184YBQ
released
Annotation file set
: Accessible chromatin annotation of kidney epithelial cell of proximal tubule from DHS-seq
Lab:
AMP-T2D consortium
Project:
AMP