Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Annotation type
3
accessible chromatin
Annotation Category
3
cis-regulatory elements
Annotation type Category
2
snATAC-seq
1
ATAC-seq
Available data
3
bed bed3+
3
bigWig
File set status
3
released
Genome assembly (visualization)
11
hg19
3
GRCh38
Organism
3
Homo sapiens
Biosample type
3
primary cell
Biosample term
17
muscle of arm
16
muscle of leg
13
muscle of back
8
body of pancreas
8
islet of Langerhans
6
pancreas
6
pancreatic acinar cell
6
pancreatic ductal cell
6
skeletal muscle satellite cell
4
endocrine pancreas
4
gastrocnemius medialis
4
gastrocnemius medialis(Muscle - Skeletal)
4
left ventricle myocardium
4
muscle of trunk
4
pancreatic beta cell
4
psoas muscle
3
esophagus muscularis mucosa
3
pancreatic A cell
3
pancreatic alpha cell
3
skeletal muscle fiber
3
skeletal muscle tissue
3
type B pancreatic cell
2
pancreatic delta cell
2
pancreatic stellate cell
2
skeletal muscle cell
2
stomach smooth muscle
2
type I muscle cell
2
type II muscle cell
1
hindlimb muscle
1
8988T
1
A673
1
EndoC_BH1
1
HPDE6-E6E7
1
LHCN-M2
1
Panc1
1
SJCRH30
1
forelimb muscle
1
gastroesophageal sphincter
1
pancreatic D cell
1
pancreatic PP cell
1
rectum smooth muscle tissue
Organ
3
epithelium
3
pancreas
0
musculature of body
Life stage
1
adult
Date released
2
November, 2021
1
October, 2019
Software used
3
macs
Lab
2
Bing Ren, UCSD
1
AMP-T2D consortium
Project
2
ENCODE
1
AMP
RFA
2
ENCODE3
1
AMP
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
FileSet
DSR853JCR
released
Annotation file set
: Accessible chromatin annotation of Pancreatic Alpha Cell 2 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR959HLG
released
Annotation file set
: Accessible chromatin annotation of Pancreatic Alpha Cell 1 from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR110ITH
released
Annotation file set
: Pancreatic alpha cell accessible chromatin annotation of overlapping ATAC-seq sites from 5 samples with most significant peak selected
Lab:
AMP-T2D consortium
Project:
AMP