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Schema
Citing CMDGA
Clear Filters
Annotation type
4
chromatin state
Annotation Category
4
cis-regulatory elements
Annotation type Category
4
ChIP-seq
Available data
4
bed bed9
File set status
4
released
Genome assembly (visualization)
18
hg19
4
GRCh38
Organism
4
Homo sapiens
Biosample type
4
tissue
Biosample term
97
monocyte
54
HeLa-S3
38
H1-hESC
27
neural progenitor cell
25
kidney
24
heart
22
K562
20
fibroblast
19
HFFc6
19
brain
19
endothelial cell
19
pericyte cell
19
stomach
18
A549
18
hepatocyte
17
muscle of arm
16
endothelial cell of hepatic sinusoid
16
lung
16
muscle of leg
15
small intestine
14
adrenal gland
14
placenta
14
smooth muscle cell
13
common myeloid progenitor, CD34-positive
13
excitatory neuron
13
large intestine
13
left lung
13
muscle of back
12
macrophage
11
B cell
11
astrocyte
11
coronary artery
11
heart left ventricle
11
right kidney
11
right lung
11
thymus
10
hematopoietic multipotent progenitor cell
10
renal cortex interstitium
10
renal pelvis
10
tibial nerve
9
CD4-positive, alpha-beta memory T cell
9
T cell
9
left kidney
9
liver
9
tibial artery
8
ascending aorta
8
body of pancreas
8
caudate nucleus
8
omental fat pad
8
right atrium auricular region
7
CD8-positive, alpha-beta memory T cell
7
GM12878
7
H9
7
cerebellum
7
colon epithelial cell
7
frontal cortex
7
left cardiac atrium
7
lymphocyte
7
spinal cord
7
spleen
6
Ammon's horn
6
HepG2
6
adipose tissue
6
fibroblast of cardiac tissue
6
heart right ventricle
6
keratinocyte
6
mononuclear cell
6
olfactory receptor cell
6
pancreatic acinar cell
6
pancreatic ductal cell
6
putamen
6
skeletal muscle satellite cell
6
subcutaneous adipose tissue
6
substantia nigra
5
MCF-7
5
cortical cell of adrenal gland
5
endothelial cell of umbilical vein
5
erythroblast
5
inhibitory neuron
5
islet of Langerhans
5
luminal epithelial cell of mammary gland
5
mammary gland epithelial cell
5
pancreas
5
right lobe of liver
5
sigmoid colon
5
trophoblast cell
5
type II pneumocyte
4
C1 segment of cervical spinal cord
4
CD14-positive monocyte
4
CyT49
4
HUES8
4
amygdala
4
angular gyrus
4
anterior cingulate cortex
4
aorta
4
blood vessel smooth muscle cell
4
cerebellum (Hemisphere)
4
chorionic villus
4
dorsolateral prefrontal cortex(Brain - Frontal Cortex (BA9))
4
endocrine pancreas
4
enteric smooth muscle cell
4
foreskin keratinocyte
4
gabaergic neuron
4
gastrocnemius medialis
4
gastrocnemius medialis(Muscle - Skeletal)
4
glutamatergic neuron
4
hypothalamus
4
iPSC derived cell line
4
left ventricle myocardium
4
muscle of trunk
4
nucleus accumbens
4
osteoblast
4
ovary
4
pancreatic beta cell
4
psoas muscle
4
retina
4
skin fibroblast
4
smooth muscle cell of the esophagus
4
temporal lobe
4
thoracic aorta
4
thyroid gland
4
transverse colon
3
cardiac fibroblast
3
CD4-positive helper T cell
3
HCT116
3
Peyer's patch
3
T-helper 1 cell
3
T-helper 17 cell
3
T-helper 2 cell
3
adipocyte
3
cardiac muscle cell
3
chorion membrane
3
endocardial cell
3
endometrium adenocarcinoma
3
endothelial cell of lymphatic vessel
3
enteric neuron
3
enterocyte
3
fibroblast of dermis
3
fibroblast of lung
3
hepatic stellate cell
3
immortal human breast epithelial cell line cell
3
kidney tubule cell
3
layer of hippocampus
3
left renal cortex interstitium
3
left renal pelvis
3
mesenchymal stem cell
3
mesothelial cell
3
naive T cell
3
natural killer cell
3
neurosphere
3
oligodendrocyte precursor cell
3
pancreatic A cell
3
pancreatic alpha cell
3
regulatory T cell
3
retinal pigment epithelial cell
3
right cardiac atrium
3
right renal cortex interstitium
3
right renal pelvis
3
schwann cell
3
skeletal muscle fiber
3
skeletal muscle tissue
3
testis
3
type B pancreatic cell
3
type I pneumocyte
3
upper lobe of left lung
2
22Rv1
2
Brodmann (1909) area 46
2
CD4-positive, alpha-beta T cell
2
CD8-positive, alpha-beta T cell
2
GM18507
2
GM19238
2
GM19239
2
GM19240
2
LNCaP clone FGC
2
Muller cell
2
NAMALWA cell
2
Pancreatic progenitors (progenitor cell of endocrine pancreas)
2
SK-N-DZ
2
SK-N-SH
2
T47D
2
alveolar macrophage
2
astrocyte of the cerebellum
2
astrocyte of the hippocampus
2
basal cell
2
basal cell of epidermis
2
brain microvascular endothelial cell
2
breast epithelium
2
bronchial epithelial cell
2
cardiac endothelial cell
2
cerebellar cortex
2
choroid plexus epithelial cell
2
ciliated cell
2
cingulate gyrus
2
club cell
2
colon goblet cell
2
colonic mucosa
2
dermis blood vessel endothelial cell
2
dermis lymphatic vessel endothelial cell
2
duodenal mucosa
2
eccrine cell
Organ
4
intestine
4
large intestine
Life stage
4
adult
Date released
4
September, 2022
Software used
4
chromhmm
qTLtools
Lab
4
AMP-T2D consortium
Project
4
AMP
RFA
4
AMP
biosample_term_name!
prostate gland
software_used.software.name!
qTLtools
Showing 4 of 4 results
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Download
FileSet
DSR160UQZ
released
Annotation file set
: Chromatin states for BSS01851 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR172AJC
released
Annotation file set
: Chromatin states for BSS01850 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR096PNG
released
Annotation file set
: Chromatin states for BSS01849 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR286PKV
released
Annotation file set
: Chromatin states for BSS01848 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP