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Schema
Clear Filters
Annotation type
2
chromatin state
1
accessible chromatin
1
target gene predictions
Annotation Category
3
cis-regulatory elements
1
Target gene links
Annotation type Category
2
ChIP-seq
1
ATAC-seq
1
snATAC-seq
Available data
2
bed bed3+
2
bed bed9
1
bigWig
File set status
4
released
Genome assembly (visualization)
16
hg19
4
GRCh38
Organism
4
Homo sapiens
Biosample type
4
primary cell
Biosample term
2
bronchial epithelial cell
2
club cell
Organ
574
blood
570
brain
235
epithelium
212
heart
209
lung
192
kidney
148
intestine
139
skin of body
128
connective tissue
115
liver
111
muscle organ
100
musculature of body
95
large intestine
87
blood vessel
87
vasculature
80
embryo
79
pancreas
78
limb
68
eye
68
uterus
65
extraembryonic component
56
thymus
54
adrenal gland
54
stomach
53
bodily fluid
43
placenta
38
bone element
37
mammary gland
37
small intestine
37
spleen
33
artery
31
thyroid gland
27
adipose tissue
27
gonad
25
ureter
23
prostate gland
19
spinal cord
17
esophagus
16
ovary
15
skeleton
11
nerve
11
testis
10
penis
8
lymph node
7
mouth
6
lymphoid tissue
6
vein
5
breast
5
lymphatic vessel
5
urinary bladder
5
vagina
4
bronchus
4
tongue
2
bone marrow
1
embryonic structure
1
gallbladder
1
nose
1
pituitary gland
Life stage
2
unknown
Date released
2
November, 2021
2
September, 2022
Software used
2
chromhmm
1
abc
1
macs
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Project
2
AMP
2
ENCODE
Collection Tags
2
AMP
2
EpiMap
2
T2DKP
RFA
2
AMP
2
ENCODE3
Showing 4 of 4 results
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Download
FileSet
DSR702JKN
released
Annotation file set
: Chromatin states for BSS00153 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR524OJC
released
Annotation file set
: Chromatin states for BSS00150 using the 18-state Roadmap model from EpiMap
Lab:
AMP-T2D consortium
Project:
AMP
FileSet
DSR905LLL
released
Annotation file set
: Target gene predictions of Club Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE
FileSet
DSR678WWH
released
Annotation file set
: Accessible chromatin annotation of Club Cell from snATAC from Bing Ren Lab
Lab:
Bing Ren, UCSD
Project:
ENCODE