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Clear Filters
Annotation type
  • 3candidate regulatory elements
  • 2accessible chromatin
  • 2chromatin state
  • 1target gene predictions
Annotation Category
  • 7cis-regulatory elements
  • 1Target gene links
Annotation type Category
  • 5snATAC-seq
  • 2ChIP-seq
  • 1ATAC-seq
Available data
  • 6bed bed3+
  • 2bed bed9
  • 2bigWig
File set status
  • 8released
Genome assembly (visualization)
  • 19hg19
  • 8GRCh38
Organism
  • 8Homo sapiens
Biosample type
  • 8primary cell
Biosample term
  • 6endothelial cell of lymphatic vessel
  • 2dermis lymphatic vessel endothelial cell
Organ
  • 243epithelium
  • 152brain
  • 130connective tissue
  • 105kidney
  • 96musculature of body
  • 95heart
  • 90vasculature
  • 80embryo
  • 80lung
  • 79intestine
  • 78limb
  • 74blood vessel
  • 62liver
  • 61pancreas
  • 58uterus
  • 53bodily fluid
  • 51blood
  • 47skin of body
  • 43large intestine
  • 37extraembryonic component
  • 33stomach
  • 28artery
  • 25adrenal gland
  • 24small intestine
  • 23adipose tissue
  • 23bone element
  • 20mammary gland
  • 19placenta
  • 16eye
  • 16ureter
  • 14esophagus
  • 14prostate gland
  • 13gonad
  • 13spinal cord
  • 12thymus
  • 11nerve
  • 11skeleton
  • 10penis
  • 8lymph node
  • 8lymphatic vessel
  • 8spleen
  • 7ovary
  • 7thyroid gland
  • 6lymphoid tissue
  • 6testis
  • 5mouth
  • 5vein
  • 4bronchus
  • 3breast
  • 3vagina
  • 2bone marrow
  • 2tongue
  • 2urinary bladder
  • 1nose
  • 1pituitary gland
Life stage
  • 3adult
  • 2unknown
Date released
  • 3May, 2024
  • 3November, 2021
  • 2September, 2022
Software used
  • 2chromhmm
  • 2macs
  • 1abc
Lab
  • 3Bing Ren, UCSD
  • 3Kyle Gaulton, UCSD
  • 2AMP-T2D consortium
Project
  • 5AMP
  • 3ENCODE
Collection Tags
  • 3AMP
  • 3T2DKP
  • 2EpiMap
  • 2FNIH_projects-heart
  • 1FNIH_projects-liver
RFA
  • 3AMP2
  • 3ENCODE3
  • 2AMP

Showing 8 of 8 results

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  • FileSet

    DSR917OEJ

    released

    Annotation file set: Candidate cis-Regulatory Elements (cCREs) of endothelial cell of lymphatic vessel derived from liver snATAC-seq
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    DSR268YRD

    released

    Annotation file set: Candidate cis-Regulatory Elements (cCREs) of endothelial cell of lymphatic vessel derived from RV snATAC-seq
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    DSR653TRR

    released

    Annotation file set: Candidate cis-Regulatory Elements (cCREs) of endothelial cell of lymphatic vessel derived from LV snATAC-seq
    Lab: Kyle Gaulton, UCSD
    Project: AMP
  • FileSet

    DSR492AJM

    released

    Annotation file set: Chromatin states for BSS00264 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR019ZDM

    released

    Annotation file set: Chromatin states for BSS00262 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR451QZS

    released

    Annotation file set: Target gene predictions of Lymphatic Endothelial Cell from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: ENCODE
  • FileSet

    DSR427DYD

    released

    Annotation file set: Accessible chromatin annotation of Lymphatic Endothelial Cell from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: ENCODE
  • FileSet

    DSR093JYI

    released

    Annotation file set: Accessible chromatin annotation of Fetal Lymphatic Endothelial Cell from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: ENCODE
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