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Clear Filters
Annotation type
  • 4chromatin state
  • 2target gene predictions
  • 1eQTL
Annotation Category
  • 4cis-regulatory elements
  • 2Target gene links
  • 1Genetic variant effects
Annotation type Category
  • 4ChIP-seq
  • 2DNase-seq
  • 1RNA-seq
Available data
  • 4bed bed9
  • 3bed bed3+
File set status
  • 7released
Genome assembly (visualization)
  • 17hg19
  • 7GRCh38
Organism
  • 7Homo sapiens
Biosample type
  • 5tissue
  • 1cell line
  • 1primary cell
Biosample term
  • 4tongue
  • 1ACC112
  • 1fibroblast of gingiva
  • 1minor salivary gland
Organ
  • 574blood
  • 570brain
  • 235epithelium
  • 212heart
  • 209lung
  • 192kidney
  • 148intestine
  • 139skin of body
  • 128connective tissue
  • 115liver
  • 111muscle organ
  • 100musculature of body
  • 95large intestine
  • 87blood vessel
  • 87vasculature
  • 80embryo
  • 79pancreas
  • 78limb
  • 68eye
  • 68uterus
  • 65extraembryonic component
  • 56thymus
  • 54adrenal gland
  • 54stomach
  • 53bodily fluid
  • 43placenta
  • 38bone element
  • 37mammary gland
  • 37small intestine
  • 37spleen
  • 33artery
  • 31thyroid gland
  • 27adipose tissue
  • 27gonad
  • 25ureter
  • 23prostate gland
  • 19spinal cord
  • 17esophagus
  • 16ovary
  • 15skeleton
  • 11nerve
  • 11testis
  • 10penis
  • 8lymph node
  • 7mouth
  • 6lymphoid tissue
  • 6vein
  • 5breast
  • 5lymphatic vessel
  • 5urinary bladder
  • 5vagina
  • 4bronchus
  • 4tongue
  • 2bone marrow
  • 1embryonic structure
  • 1gallbladder
  • 1nose
  • 1pituitary gland
Life stage
  • 2embryonic
  • 1adult
  • 1unknown
Date released
  • 4September, 2022
  • 2July, 2026
  • 1January, 2022
Software used
  • 4chromhmm
  • 1qTLtools
Lab
  • 7AMP-T2D consortium
Project
  • 7AMP
Collection Tags
  • 4EpiMap
  • 2ENCODE-rE2G
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
RFA
  • 7AMP

Showing 7 of 7 results

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  • FileSet

    DSR163774

    released

    Annotation file set: Target gene predictions for tongue (UBERON:0001723) derived from ENCODE-rE2G (ENCSR469MPM).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR305897

    released

    Annotation file set: Target gene predictions for tongue (UBERON:0001723) derived from ENCODE-rE2G (ENCSR598IFM).
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR981JBX

    released

    Annotation file set: Chromatin states for BSS00036 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR744RHI

    released

    Annotation file set: Chromatin states for BSS01846 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR992FWK

    released

    Annotation file set: Chromatin states for BSS01845 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR302IPT

    released

    Annotation file set: Chromatin states for BSS00338 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR273PPM

    released

    Annotation file set: minor salivary gland eQTL of studay GTEx from eQTL Catalogue
    Lab: AMP-T2D consortium
    Project: AMP
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