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Clear Filters
Annotation type
  • 4chromatin state
  • 1accessible chromatin
  • 1eQTL
  • 1target gene predictions
Annotation Category
  • 5cis-regulatory elements
  • 1Genetic variant effects
  • 1Target gene links
Annotation type Category
  • 4ChIP-seq
  • 1ATAC-seq
  • 1RNA-seq
  • 1snATAC-seq
Available data
  • 4bed bed9
  • 3bed bed3+
  • 1bigWig
File set status
  • 7released
Genome assembly (visualization)
  • 21hg19
  • 7GRCh38
Organism
  • 7Homo sapiens
Biosample type
  • 5tissue
  • 2primary cell
Biosample term
  • 5thyroid gland
  • 2thyroid follicular cell
Organ
  • 243epithelium
  • 152brain
  • 130connective tissue
  • 105kidney
  • 96musculature of body
  • 95heart
  • 90vasculature
  • 80embryo
  • 80lung
  • 79intestine
  • 78limb
  • 74blood vessel
  • 62liver
  • 61pancreas
  • 58uterus
  • 53bodily fluid
  • 51blood
  • 47skin of body
  • 43large intestine
  • 37extraembryonic component
  • 33stomach
  • 28artery
  • 25adrenal gland
  • 24small intestine
  • 23adipose tissue
  • 23bone element
  • 20mammary gland
  • 19placenta
  • 16eye
  • 16ureter
  • 14esophagus
  • 14prostate gland
  • 13gonad
  • 13spinal cord
  • 12thymus
  • 11nerve
  • 11skeleton
  • 10penis
  • 8lymph node
  • 8lymphatic vessel
  • 8spleen
  • 7ovary
  • 7thyroid gland
  • 6lymphoid tissue
  • 6testis
  • 5mouth
  • 5vein
  • 4bronchus
  • 3breast
  • 3vagina
  • 2bone marrow
  • 2tongue
  • 2urinary bladder
  • 1nose
  • 1pituitary gland
Life stage
  • 4adult
Date released
  • 4September, 2022
  • 2November, 2021
  • 1January, 2022
Software used
  • 4chromhmm
  • 1abc
  • 1macs
  • 1qTLtools
Lab
  • 5AMP-T2D consortium
  • 2Bing Ren, UCSD
Project
  • 5AMP
  • 2ENCODE
Collection Tags
  • 4EpiMap
  • 2AMP
  • 2T2DKP
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
RFA
  • 5AMP
  • 2ENCODE3

Showing 7 of 7 results

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  • FileSet

    DSR504JAJ

    released

    Annotation file set: Chromatin states for BSS01835 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR322WEB

    released

    Annotation file set: Chromatin states for BSS01834 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR368OVH

    released

    Annotation file set: Chromatin states for BSS01832 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR097DAL

    released

    Annotation file set: Chromatin states for BSS01831 using the 18-state Roadmap model from EpiMap
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR782PKI

    released

    Annotation file set: thyroid eQTL of studay GTEx from eQTL Catalogue
    Lab: AMP-T2D consortium
    Project: AMP
  • FileSet

    DSR121IWB

    released

    Annotation file set: Target gene predictions of Thyroid Follicular Cell from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: ENCODE
  • FileSet

    DSR356XOM

    released

    Annotation file set: Accessible chromatin annotation of Thyroid Follicular Cell from snATAC from Bing Ren Lab
    Lab: Bing Ren, UCSD
    Project: ENCODE
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